RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 CDHR2Q9BYE9 1310 aa30.13■■■□□ 2.41
YIF1A-201ENST00000359461 GRAPQ13588 217 aa30.12■■■□□ 2.41
YIF1A-201ENST00000359461 CCDC146Q8IYE0 955 aa30.12■■■□□ 2.41
YIF1A-201ENST00000359461 MPNDQ8N594 471 aa30.12■■■□□ 2.41
YIF1A-201ENST00000359461 GRAPLQ8TC17 118 aaPredicted RBP30.12■■■□□ 2.41
YIF1A-201ENST00000359461 HOXB7P09629 217 aa30.11■■■□□ 2.41
YIF1A-201ENST00000359461 DDX46Q7L014 1031 aaKnown RBP30.11■■■□□ 2.41
YIF1A-201ENST00000359461 CHPF2Q9P2E5 772 aa30.11■■■□□ 2.41
YIF1A-201ENST00000359461 MAP2K1Q02750 393 aaPredicted RBP30.1■■■□□ 2.41
YIF1A-201ENST00000359461 CST9Q5W186 159 aa30.1■■■□□ 2.41
YIF1A-201ENST00000359461 COL4A1P02462 1669 aa30.1■■■□□ 2.41
YIF1A-201ENST00000359461 TRAF5O00463 557 aa30.09■■■□□ 2.41
YIF1A-201ENST00000359461 HSPA8P11142 646 aaKnown RBP30.09■■■□□ 2.41
YIF1A-201ENST00000359461 GMPSP49915 693 aaPredicted RBP30.09■■■□□ 2.41
YIF1A-201ENST00000359461 LBX1P52954 281 aa30.09■■■□□ 2.41
YIF1A-201ENST00000359461 NEUROD2Q15784 382 aa30.09■■■□□ 2.41
YIF1A-201ENST00000359461 TMC4Q7Z404 712 aa30.09■■■□□ 2.41
YIF1A-201ENST00000359461 RUNDC1Q96C34 613 aa30.09■■■□□ 2.41
YIF1A-201ENST00000359461 PLBD2Q8NHP8 589 aa30.08■■■□□ 2.41
YIF1A-201ENST00000359461 HDGFL1Q5TGJ6 251 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 CIAPIN1Q6FI81 312 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 CAPNS2Q96L46 248 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 ISCA1Q9BUE6 129 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 PGAP2Q9UHJ9 254 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 TLL2Q9Y6L7 1015 aa30.07■■■□□ 2.4
YIF1A-201ENST00000359461 ECE1P42892 770 aa30.05■■■□□ 2.4
YIF1A-201ENST00000359461 YDJCA8MPS7 323 aa30.04■■■□□ 2.4
YIF1A-201ENST00000359461 DBF4Q9UBU7 674 aaPredicted RBP30.04■■■□□ 2.4
YIF1A-201ENST00000359461 RAD17O75943 681 aa30.03■■■□□ 2.4
YIF1A-201ENST00000359461 TNIP1Q15025 636 aa30.03■■■□□ 2.4
YIF1A-201ENST00000359461 CYP4F22Q6NT55 531 aa30.03■■■□□ 2.4
YIF1A-201ENST00000359461 ANKRD13DQ6ZTN6 518 aa30.03■■■□□ 2.4
YIF1A-201ENST00000359461 LAS1LQ9Y4W2 734 aaKnown RBP30.03■■■□□ 2.4
YIF1A-201ENST00000359461 WDR43Q15061 677 aaKnown RBP eCLIP30.02■■■□□ 2.4
YIF1A-201ENST00000359461 SF3B3Q15393 1217 aaKnown RBP30.02■■■□□ 2.4
YIF1A-201ENST00000359461 ZC3H15Q8WU90 426 aaKnown RBP30.02■■■□□ 2.4
YIF1A-201ENST00000359461 CFAP44Q96MT7 982 aa30.02■■■□□ 2.4
YIF1A-201ENST00000359461 DDX10Q13206 875 aaKnown RBP30.01■■■□□ 2.39
YIF1A-201ENST00000359461 HIRAP54198 1017 aaPredicted RBP30■■■□□ 2.39
YIF1A-201ENST00000359461 GPR101Q96P66 508 aaPredicted RBP30■■■□□ 2.39
YIF1A-201ENST00000359461 GLIS2Q9BZE0 524 aaPredicted RBP30■■■□□ 2.39
YIF1A-201ENST00000359461 ADAMTS8Q9UP79 889 aa30■■■□□ 2.39
YIF1A-201ENST00000359461 TRIM28Q13263 835 aaKnown RBP29.99■■■□□ 2.39
YIF1A-201ENST00000359461 SAPCD2Q86UD0 394 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 TRPM4Q8TD43 1214 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 CELF1Q92879 486 aaKnown RBP29.99■■■□□ 2.39
YIF1A-201ENST00000359461 ZNF428Q96B54 188 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 FAM89AQ96GI7 184 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 HHIPL1Q96JK4 782 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 BCL2L13Q9BXK5 485 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 HYPKQ9NX55 129 aa29.99■■■□□ 2.39
YIF1A-201ENST00000359461 SCN9AQ15858 1988 aa29.98■■■□□ 2.39
YIF1A-201ENST00000359461 ATP5J2-PTCD1G3V325 749 aa29.98■■■□□ 2.39
YIF1A-201ENST00000359461 PAXIP1Q6ZW49 1069 aaPredicted RBP29.98■■■□□ 2.39
YIF1A-201ENST00000359461 CELF2O95319 508 aaKnown RBP29.97■■■□□ 2.39
YIF1A-201ENST00000359461 DUSP27Q5VZP5 1158 aa29.97■■■□□ 2.39
YIF1A-201ENST00000359461 MBIPQ9NS73 344 aa29.97■■■□□ 2.39
YIF1A-201ENST00000359461 POLR2AP24928 1970 aaKnown RBP29.97■■■□□ 2.39
YIF1A-201ENST00000359461 PSME4Q14997 1843 aa29.96■■■□□ 2.39
YIF1A-201ENST00000359461 SHTN1A0MZ66 631 aa29.96■■■□□ 2.39
YIF1A-201ENST00000359461 ZNF853P0CG23 659 aa29.96■■■□□ 2.39
YIF1A-201ENST00000359461 CNOT7Q9UIV1 285 aaKnown RBP29.96■■■□□ 2.39
YIF1A-201ENST00000359461 MAP2K2P36507 400 aa29.95■■■□□ 2.39
YIF1A-201ENST00000359461 WASHC4Q2M389 1173 aa29.94■■■□□ 2.38
YIF1A-201ENST00000359461 MICALL2Q8IY33 904 aa29.94■■■□□ 2.38
YIF1A-201ENST00000359461 DPF2Q92785 391 aa29.94■■■□□ 2.38
YIF1A-201ENST00000359461 GRM1Q13255 1194 aa29.93■■■□□ 2.38
YIF1A-201ENST00000359461 CDC37L1Q7L3B6 337 aa29.93■■■□□ 2.38
YIF1A-201ENST00000359461 BEGAINQ9BUH8 593 aa29.93■■■□□ 2.38
YIF1A-201ENST00000359461 POLLQ9UGP5 575 aa29.93■■■□□ 2.38
YIF1A-201ENST00000359461 NSFL1CQ9UNZ2 370 aaKnown RBP29.93■■■□□ 2.38
YIF1A-201ENST00000359461 PSMD14O00487 310 aa29.92■■■□□ 2.38
YIF1A-201ENST00000359461 IRS4O14654 1257 aaPredicted RBP29.92■■■□□ 2.38
YIF1A-201ENST00000359461 AOC2O75106 756 aa29.92■■■□□ 2.38
YIF1A-201ENST00000359461 GPSM2P81274 684 aa29.92■■■□□ 2.38
YIF1A-201ENST00000359461 H7C1D1 291 aa29.91■■■□□ 2.38
YIF1A-201ENST00000359461 ABHD8Q96I13 439 aa29.91■■■□□ 2.38
YIF1A-201ENST00000359461 DBNDD1Q9H9R9 158 aa29.91■■■□□ 2.38
YIF1A-201ENST00000359461 ZBTB12Q9Y330 459 aaPredicted RBP29.91■■■□□ 2.38
YIF1A-201ENST00000359461 RTL9Q8NET4 1388 aa29.9■■■□□ 2.38
YIF1A-201ENST00000359461 RTL5Q5HYW3 569 aaPredicted RBP29.89■■■□□ 2.38
YIF1A-201ENST00000359461 IFT57Q9NWB7 429 aa29.89■■■□□ 2.38
YIF1A-201ENST00000359461 ECE2O60344 883 aa29.88■■■□□ 2.37
YIF1A-201ENST00000359461 RPS12P25398 132 aaKnown RBP29.88■■■□□ 2.37
YIF1A-201ENST00000359461 ZBTB38Q8NAP3 1195 aaPredicted RBP29.88■■■□□ 2.37
YIF1A-201ENST00000359461 EYA3Q99504 573 aa29.88■■■□□ 2.37
YIF1A-201ENST00000359461 MYH3P11055 1940 aa29.88■■■□□ 2.37
YIF1A-201ENST00000359461 C6orf229H3BNL8 230 aa29.87■■■□□ 2.37
YIF1A-201ENST00000359461 BRPF1P55201 1214 aaPredicted RBP29.87■■■□□ 2.37
YIF1A-201ENST00000359461 RPS8P62241 208 aaKnown RBP29.87■■■□□ 2.37
YIF1A-201ENST00000359461 GOLGA2Q08379 1002 aa29.87■■■□□ 2.37
YIF1A-201ENST00000359461 TBC1D16Q8TBP0 767 aa29.87■■■□□ 2.37
YIF1A-201ENST00000359461 PRKRIP1Q9H875 184 aaPredicted RBP29.87■■■□□ 2.37
YIF1A-201ENST00000359461 PODXL2Q9NZ53 605 aa29.87■■■□□ 2.37
YIF1A-201ENST00000359461 ZNF609O15014 1411 aa29.87■■■□□ 2.37
YIF1A-201ENST00000359461 RIMBP2O15034 1052 aa29.86■■■□□ 2.37
YIF1A-201ENST00000359461 CA12O43570 354 aa29.86■■■□□ 2.37
YIF1A-201ENST00000359461 EGFRP00533 1210 aa29.86■■■□□ 2.37
YIF1A-201ENST00000359461 SAMD7Q7Z3H4 446 aa29.86■■■□□ 2.37
YIF1A-201ENST00000359461 RIC3Q7Z5B4 369 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms