RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 CREB3O43889 395 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 HSF2BPO75031 334 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 TEX11Q8IYF3 940 aa7.96□□□□□ -1.14
NF1-202ENST00000358273 FILIP1LQ4L180 1135 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 ARHGEF12Q9NZN5 1544 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 FAN1Q9Y2M0 1017 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 KIAA1107Q9UPP5 1409 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 MED4Q9NPJ6 270 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 KCNG1Q9UIX4 513 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 GJB2P29033 226 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 FBLN2P98095 1184 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 DDX27Q96GQ7 796 aaKnown RBP7.95□□□□□ -1.14
NF1-202ENST00000358273 BIN1O00499 593 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 ARMC9Q7Z3E5 817 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 ELF1P32519 619 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 HPDP32754 393 aaPredicted RBP7.95□□□□□ -1.14
NF1-202ENST00000358273 ARL10Q8N8L6 244 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 FBXO18Q8NFZ0 1043 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 NECTIN2Q92692 538 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
NF1-202ENST00000358273 CCDC158Q5M9N0 1113 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 PPP1R12CQ9BZL4 782 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 GCFC2P16383 781 aaKnown RBP7.95□□□□□ -1.14
NF1-202ENST00000358273 SMIM24O75264 130 aa7.95□□□□□ -1.14
NF1-202ENST00000358273 EXOSC9Q06265 439 aaKnown RBP7.95□□□□□ -1.14
NF1-202ENST00000358273 PPFIA4O75335 1185 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 PAX7P23759 505 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 SPECC1Q5M775 1068 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 SSH1Q8WYL5 1049 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 CAPS2Q9BXY5 557 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 API5Q9BZZ5 524 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 DNM1Q05193 864 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 FAM43BQ6ZT52 329 aaPredicted RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 CAPZA3Q96KX2 299 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 ABCC11Q96J66 1382 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 VPS41P49754 854 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 BRD3Q15059 726 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 SRCIN1Q9C0H9 1055 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 GOLGA6BA6NDN3 693 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 TULP2O00295 520 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 RPSAP08865 295 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 SEPT7Q16181 437 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 ANKRD65E5RJM6 399 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 NEXNQ0ZGT2 675 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 SPECC1LQ69YQ0 1117 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 GIGYF2Q6Y7W6 1299 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 EFCAB8A8MWE9 144 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 CAPRIN2Q6IMN6 1127 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 CCDC83Q8IWF9 413 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 SH2B1Q9NRF2 756 aaPredicted RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 TBC1D22AQ8WUA7 517 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 ETAA1Q9NY74 926 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 NRBP1Q9UHY1 535 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 CCDC38Q502W7 563 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 LRRC23Q53EV4 343 aaPredicted RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 KCNF1Q9H3M0 494 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 ATG3Q9NT62 314 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 KARSQ15046 597 aaKnown RBP7.94□□□□□ -1.14
NF1-202ENST00000358273 TSNAXIP1Q2TAA8 658 aa7.94□□□□□ -1.14
NF1-202ENST00000358273 PACS2Q86VP3 889 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.93□□□□□ -1.14
NF1-202ENST00000358273 PUF60Q9UHX1 559 aaKnown RBP7.93□□□□□ -1.14
NF1-202ENST00000358273 TTC41PQ6P2S7 1318 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 ADAM21Q9UKJ8 722 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 GBP5Q96PP8 586 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 PRXQ9BXM0 1461 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 CHD5Q8TDI0 1954 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 FBXW10Q5XX13 1052 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 LCMT1Q9UIC8 334 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 ST5P78524 1137 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 E2F5Q15329 346 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 PCK1P35558 622 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 SPDL1Q96EA4 605 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 CBX8Q9HC52 389 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 PTPRCP08575 1304 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 PFDN1O60925 122 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 CORO7P57737 925 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 TRAF1Q13077 416 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 ZSCAN31Q96LW9 406 aaPredicted RBP7.93□□□□□ -1.14
NF1-202ENST00000358273 KIF9Q9HAQ2 790 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 TSPY2A6NKD2 308 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 TSPY3P0CV98 308 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 TSPY8P0CW00 308 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 TSPY1Q01534 308 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 SPATS2Q86XZ4 545 aaKnown RBP7.93□□□□□ -1.14
NF1-202ENST00000358273 E9PCH4 1651 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 CPLX1O14810 134 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 IFFO1Q0D2I5 559 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 HSP90AA4PQ58FG1 418 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 KNL1Q8NG31 2342 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 ATICP31939 592 aa7.93□□□□□ -1.14
NF1-202ENST00000358273 JAKMIP1Q96N16 626 aaKnown RBP7.93□□□□□ -1.14
NF1-202ENST00000358273 RNF40O75150 1001 aa7.92□□□□□ -1.14
NF1-202ENST00000358273 TUBB4BP68371 445 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms