RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 UTP14AQ9BVJ6 771 aaKnown RBP11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 TRAF5O00463 557 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 MAP2K2P36507 400 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 AOC3Q16853 763 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 SUPT20HQ8NEM7 779 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 ABCC4O15439 1325 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
COL4A3BP-202ENST00000357457 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 TSPYL4Q9UJ04 414 aa11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
COL4A3BP-202ENST00000357457 LAMB2P55268 1798 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 RGS19P49795 217 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
COL4A3BP-202ENST00000357457 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 TAF1P21675 1872 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 DPP8Q6V1X1 898 aaPredicted RBP11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 MPNDQ8N594 471 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
COL4A3BP-202ENST00000357457 CA12O43570 354 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 AOC2O75106 756 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 ANXA1P04083 346 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 RIPK4P57078 832 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 GRAPQ13588 217 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 TNIP1Q15025 636 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
COL4A3BP-202ENST00000357457 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 CDC37L1Q7L3B6 337 aa11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 GLIS2Q9BZE0 524 aaPredicted RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 SH3TC1Q8TE82 1336 aa11.26□□□□□ -0.61
COL4A3BP-202ENST00000357457 CHL1O00533 1208 aa11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 RAD17O75943 681 aa11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 DPF2Q92785 391 aa11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
COL4A3BP-202ENST00000357457 H7C1D1 291 aa11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 LMOD3Q0VAK6 560 aa11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 GRM1Q13255 1194 aa11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
COL4A3BP-202ENST00000357457 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 SLC34A2O95436 690 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
COL4A3BP-202ENST00000357457 CCDC85CA6NKD9 419 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 PSMD14O00487 310 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 NOGQ13253 232 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 RALBP1Q15311 655 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
COL4A3BP-202ENST00000357457 HOXB7P09629 217 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 RPS12P25398 132 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms