RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 KIRREL3Q8IZU9 778 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 RBM27Q9P2N5 1060 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 U3KPZ7 1027 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 HEATR3Q7Z4Q2 680 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CTTNBP2NLQ9P2B4 639 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 PLCB4Q15147 1175 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 GCKP35557 465 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 NCAPGQ9BPX3 1015 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 STK24Q9Y6E0 443 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 SRGAP3O43295 1099 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 PPP2R5AQ15172 486 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 FKBP15Q5T1M5 1219 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 GBP5Q96PP8 586 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 TSC22D1Q15714 1073 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 VWA3BQ502W6 1294 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 AFAP1L1Q8TED9 768 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ZSCAN26Q16670 478 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 SMC5Q8IY18 1101 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 IKBKGQ9Y6K9 419 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 TOP1P11387 765 aaKnown RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 SDCCAG8Q86SQ7 713 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 FBXO41Q8TF61 875 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 L3MBTL2Q969R5 705 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 DDX27Q96GQ7 796 aaKnown RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 CREB3O43889 395 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 CYLC1P35663 651 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 TRIM37O94972 964 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 TRIM4Q9C037 500 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 NCAPD3P42695 1498 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 PCYT1AP49585 367 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 OSBPL9Q96SU4 736 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 COG6Q9Y2V7 657 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 AMPD3Q01432 767 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 EPS15L1Q9UBC2 864 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ABCC8Q09428 1581 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 XPCQ01831 940 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC51Q96ER9 411 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 OLFM3Q96PB7 478 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 VPS37CA5D8V6 355 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 BRAPQ7Z569 592 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 IFT81Q8WYA0 676 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ZNF287Q9HBT7 754 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 EIF3CLB5ME19 914 aaKnown RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 AFAP1L2Q8N4X5 818 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 MAN1A2O60476 641 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 TRIM60Q495X7 471 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 STXBP4Q6ZWJ1 553 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 MRPL40Q9NQ50 206 aaKnown RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 DYTNA2CJ06 578 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ATP2A2P16615 1042 aaKnown RBP5.31□□□□□ -1.56
SYNE2-203ENST00000357395 FYB2Q5VWT5 728 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ZNF148Q9UQR1 794 aa5.31□□□□□ -1.56
SYNE2-203ENST00000357395 ERICH3Q5RHP9 1530 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 TROVE2P10155 538 aaKnown RBP eCLIP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 TRAF1Q13077 416 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 ENAHQ8N8S7 591 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RUNDC1Q96C34 613 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 TFIP11Q9UBB9 837 aaKnown RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 NME8Q8N427 588 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC26Q8TAB7 109 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 PCMTD1Q96MG8 357 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 C10orf88Q9H8K7 445 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 C4BPBP20851 252 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RAB11FIP4Q86YS3 637 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 FGFR1OP2Q9NVK5 253 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 SNCBQ16143 134 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RASEFQ8IZ41 740 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RNF14Q9UBS8 474 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 TTC21AQ8NDW8 1320 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 KIF6Q6ZMV9 814 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RNF10Q8N5U6 811 aaKnown RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 ANLNQ9NQW6 1124 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 NPHP3Q7Z494 1330 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RAB11FIP3O75154 756 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 ATRIPQ8WXE1 791 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 FOXP2O15409 715 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 PANK3Q9H999 370 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 ARID3CA6NKF2 412 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 ZWINTO95229 277 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 SEMA3FQ13275 785 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC14Q49A88 953 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 KRT86O43790 486 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 PNISRQ8TF01 805 aaKnown RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 MTRF1LQ9UGC7 380 aaKnown RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 SPDYE4A6NLX3 237 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 MAGEA9P43362 315 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 NACAP1Q9BZK3 213 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 RASGRF2O14827 1237 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 IFIT2P09913 472 aaKnown RBP5.3□□□□□ -1.56
SYNE2-203ENST00000357395 CSRNP2Q9H175 543 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 NSD2O96028 1365 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 IQCA1LA6NCM1 817 aa5.3□□□□□ -1.56
SYNE2-203ENST00000357395 HIP1RO75146 1068 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 KIF5AQ12840 1032 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms