RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 USP25Q9UHP3 1055 aa21.05■□□□□ 0.96
GYPC-202ENST00000356887 RFX5P48382 616 aaPredicted RBP21.05■□□□□ 0.96
GYPC-202ENST00000356887 ZNF589Q86UQ0 364 aaPredicted RBP21.05■□□□□ 0.96
GYPC-202ENST00000356887 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
GYPC-202ENST00000356887 HMG20BQ9P0W2 317 aa21.05■□□□□ 0.96
GYPC-202ENST00000356887 TAF6LQ9Y6J9 622 aa21.05■□□□□ 0.96
GYPC-202ENST00000356887 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
GYPC-202ENST00000356887 ATP5JP18859 108 aa21.04■□□□□ 0.96
GYPC-202ENST00000356887 ANKRD13DQ6ZTN6 518 aa21.04■□□□□ 0.96
GYPC-202ENST00000356887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
GYPC-202ENST00000356887 TAF5LO75529 589 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 ADCY5O95622 1261 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
GYPC-202ENST00000356887 TOB2Q14106 344 aaPredicted RBP21.03■□□□□ 0.96
GYPC-202ENST00000356887 GIMAP6Q6P9H5 292 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 KDM4AO75164 1064 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 PDCP20941 246 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
GYPC-202ENST00000356887 PTPN12Q05209 780 aaKnown RBP21.02■□□□□ 0.96
GYPC-202ENST00000356887 KIAA2012Q0VF49 1180 aa21.02■□□□□ 0.96
GYPC-202ENST00000356887 USP16Q9Y5T5 823 aa21.02■□□□□ 0.96
GYPC-202ENST00000356887 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.96
GYPC-202ENST00000356887 SNRPA1P09661 255 aaKnown RBP21.01■□□□□ 0.95
GYPC-202ENST00000356887 TNNI3KQ59H18 835 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 CDC37L1Q7L3B6 337 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 EDC3Q96F86 508 aaKnown RBP21.01■□□□□ 0.95
GYPC-202ENST00000356887 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 DBNLQ9UJU6 430 aaKnown RBP21.01■□□□□ 0.95
GYPC-202ENST00000356887 FPGT-TNNI3KV9GXZ4 949 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 COL15A1P39059 1388 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 KRT85P78386 507 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 RABL6Q3YEC7 729 aaPredicted RBP21.01■□□□□ 0.95
GYPC-202ENST00000356887 TTC6Q86TZ1 520 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 IFNL2Q8IZJ0 200 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 NHSL1Q5SYE7 1610 aa21.01■□□□□ 0.95
GYPC-202ENST00000356887 TFCP2Q12800 502 aa21■□□□□ 0.95
GYPC-202ENST00000356887 JARID2Q92833 1246 aaPredicted RBP21■□□□□ 0.95
GYPC-202ENST00000356887 ELP1O95163 1332 aa21■□□□□ 0.95
GYPC-202ENST00000356887 MEGF6O75095 1541 aa21■□□□□ 0.95
GYPC-202ENST00000356887 ABCC6O95255 1503 aa20.99■□□□□ 0.95
GYPC-202ENST00000356887 RFX7Q2KHR2 1363 aa20.98■□□□□ 0.95
GYPC-202ENST00000356887 KRT32Q14532 448 aa20.98■□□□□ 0.95
GYPC-202ENST00000356887 FERMT3Q86UX7 667 aa20.98■□□□□ 0.95
GYPC-202ENST00000356887 SPATA31A3Q5VYP0 1347 aa20.98■□□□□ 0.95
GYPC-202ENST00000356887 DCAF5Q96JK2 942 aa20.98■□□□□ 0.95
GYPC-202ENST00000356887 SASS6Q6UVJ0 657 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 UBE3BQ7Z3V4 1068 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 ZNF830Q96NB3 372 aaPredicted RBP20.97■□□□□ 0.95
GYPC-202ENST00000356887 FMNL2Q96PY5 1086 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 COL18A1P39060 1754 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
GYPC-202ENST00000356887 UQCRHLA0A096LP55 91 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 UQCRHP07919 91 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
GYPC-202ENST00000356887 FAM173BQ6P4H8 233 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 MPNDQ8N594 471 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 PDCL3Q9H2J4 239 aa20.97■□□□□ 0.95
GYPC-202ENST00000356887 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 AFDNP55196 1824 aaKnown RBP20.96■□□□□ 0.95
GYPC-202ENST00000356887 CCDC192P0DO97 292 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 CASP7P55210 303 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 PIBF1Q8WXW3 757 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 HAUS7Q99871 368 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 PLEKHG2Q9H7P9 1386 aa20.96■□□□□ 0.95
GYPC-202ENST00000356887 CYP27B1O15528 508 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 AP5Z1O43299 807 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 NEK1Q96PY6 1258 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 DBNDD2Q9BQY9 259 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
GYPC-202ENST00000356887 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
GYPC-202ENST00000356887 ZNF609O15014 1411 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 LIG1P18858 919 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 STK3Q13188 491 aa20.95■□□□□ 0.94
GYPC-202ENST00000356887 A0A087WZG4 1122 aa20.94■□□□□ 0.94
GYPC-202ENST00000356887 TTC12Q9H892 705 aaPredicted RBP20.94■□□□□ 0.94
GYPC-202ENST00000356887 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
GYPC-202ENST00000356887 ATP5J2-PTCD1G3V325 749 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
GYPC-202ENST00000356887 MCMDC2Q4G0Z9 681 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 PLBD2Q8NHP8 589 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 GTF3C6Q969F1 213 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 NUP62CLQ9H1M0 184 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 MAP3K11Q16584 847 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 CCDC129Q6ZRS4 1044 aa20.93■□□□□ 0.94
GYPC-202ENST00000356887 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 NOLC1Q14978 699 aaKnown RBP eCLIP20.92■□□□□ 0.94
GYPC-202ENST00000356887 CABLES1Q8TDN4 633 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 LEO1Q8WVC0 666 aaPredicted RBP20.92■□□□□ 0.94
GYPC-202ENST00000356887 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
GYPC-202ENST00000356887 DNAJC2Q99543 621 aaKnown RBP20.92■□□□□ 0.94
GYPC-202ENST00000356887 TFIP11Q9UBB9 837 aaKnown RBP20.92■□□□□ 0.94
GYPC-202ENST00000356887 DYNC1I1O14576 645 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 CHGBP05060 677 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 Q6ZUG5 572 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 SPATA32Q96LK8 384 aa20.92■□□□□ 0.94
GYPC-202ENST00000356887 CYP21A2P08686 494 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms