RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 HAUS7Q99871 368 aa26.06■■□□□ 1.76
LIMS2-202ENST00000355119 CLCN1P35523 988 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 TSGA10IPQ3SY00 556 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 SHANK3Q9BYB0 1731 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 F13A1P00488 732 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 BLOC1S2Q6QNY1 142 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 CCDC191Q8NCU4 936 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 DBNDD2Q9BQY9 259 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 TJP1Q07157 1748 aa26.05■■□□□ 1.76
LIMS2-202ENST00000355119 SYCE3A1L190 88 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 ESPNB1AK53 854 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 TAF5LO75529 589 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 GJB2P29033 226 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 GPR108Q9NPR9 543 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 A1BGP04217 495 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 PDIA4P13667 645 aaKnown RBP26.04■■□□□ 1.76
LIMS2-202ENST00000355119 CHMP3Q9Y3E7 222 aa26.04■■□□□ 1.76
LIMS2-202ENST00000355119 PHF14O94880 888 aa26.03■■□□□ 1.76
LIMS2-202ENST00000355119 ME3Q16798 604 aa26.03■■□□□ 1.76
LIMS2-202ENST00000355119 USPL1Q5W0Q7 1092 aa26.03■■□□□ 1.76
LIMS2-202ENST00000355119 ZNF589Q86UQ0 364 aaPredicted RBP26.03■■□□□ 1.76
LIMS2-202ENST00000355119 DDX54Q8TDD1 881 aaKnown RBP26.03■■□□□ 1.76
LIMS2-202ENST00000355119 EDC3Q96F86 508 aaKnown RBP26.03■■□□□ 1.76
LIMS2-202ENST00000355119 KRT32Q14532 448 aa26.02■■□□□ 1.76
LIMS2-202ENST00000355119 FOXD4L6Q3SYB3 417 aaPredicted RBP26.02■■□□□ 1.76
LIMS2-202ENST00000355119 FOXD4L3Q6VB84 417 aaPredicted RBP26.02■■□□□ 1.76
LIMS2-202ENST00000355119 STRCQ7RTU9 1775 aa26.02■■□□□ 1.76
LIMS2-202ENST00000355119 RPS6KB1P23443 525 aa26.02■■□□□ 1.76
LIMS2-202ENST00000355119 EVA1CP58658 441 aa26.02■■□□□ 1.76
LIMS2-202ENST00000355119 TICAM2Q86XR7 235 aa26.02■■□□□ 1.76
LIMS2-202ENST00000355119 DNAJC2Q99543 621 aaKnown RBP26.01■■□□□ 1.75
LIMS2-202ENST00000355119 GDPD2Q9HCC8 539 aa26.01■■□□□ 1.75
LIMS2-202ENST00000355119 TPCN1Q9ULQ1 816 aa26.01■■□□□ 1.75
LIMS2-202ENST00000355119 GADD45BO75293 160 aaPredicted RBP26■■□□□ 1.75
LIMS2-202ENST00000355119 IL15P40933 162 aaPredicted RBP26■■□□□ 1.75
LIMS2-202ENST00000355119 ST3GAL1Q11201 340 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 U3KPZ7 1027 aaPredicted RBP26■■□□□ 1.75
LIMS2-202ENST00000355119 CSPP1Q1MSJ5 1256 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 ATG9AQ7Z3C6 839 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 STRN4Q9NRL3 753 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 MTMR6Q9Y217 621 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 CNPY2Q9Y2B0 182 aa26■■□□□ 1.75
LIMS2-202ENST00000355119 ZBTB3Q9H5J0 574 aa25.99■■□□□ 1.75
LIMS2-202ENST00000355119 ATG3Q9NT62 314 aa25.99■■□□□ 1.75
LIMS2-202ENST00000355119 MCMDC2Q4G0Z9 681 aa25.98■■□□□ 1.75
LIMS2-202ENST00000355119 ZNF609O15014 1411 aa25.98■■□□□ 1.75
LIMS2-202ENST00000355119 KBTBD3Q8NAB2 608 aa25.98■■□□□ 1.75
LIMS2-202ENST00000355119 TSPY26PQ9H489 355 aa25.98■■□□□ 1.75
LIMS2-202ENST00000355119 PALLDQ8WX93 1383 aa25.98■■□□□ 1.75
LIMS2-202ENST00000355119 CIAO1O76071 339 aa25.97■■□□□ 1.75
LIMS2-202ENST00000355119 NECAB1Q8N987 351 aa25.97■■□□□ 1.75
LIMS2-202ENST00000355119 EYA2O00167 538 aa25.97■■□□□ 1.75
LIMS2-202ENST00000355119 UBE2HP62256 183 aa25.97■■□□□ 1.75
LIMS2-202ENST00000355119 TMOD3Q9NYL9 352 aa25.97■■□□□ 1.75
LIMS2-202ENST00000355119 SH3TC1Q8TE82 1336 aa25.96■■□□□ 1.75
LIMS2-202ENST00000355119 ISCA1Q9BUE6 129 aa25.96■■□□□ 1.75
LIMS2-202ENST00000355119 TOGARAM1Q9Y4F4 1720 aa25.96■■□□□ 1.75
LIMS2-202ENST00000355119 ZNF335Q9H4Z2 1342 aaPredicted RBP25.96■■□□□ 1.75
LIMS2-202ENST00000355119 PDCP20941 246 aa25.95■■□□□ 1.75
LIMS2-202ENST00000355119 TEX13AQ9BXU3 409 aaPredicted RBP25.95■■□□□ 1.75
LIMS2-202ENST00000355119 NEUROD6Q96NK8 337 aa25.95■■□□□ 1.74
LIMS2-202ENST00000355119 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
LIMS2-202ENST00000355119 TOB2Q14106 344 aaPredicted RBP25.94■■□□□ 1.74
LIMS2-202ENST00000355119 CCDC183Q5T5S1 534 aa25.94■■□□□ 1.74
LIMS2-202ENST00000355119 DDX46Q7L014 1031 aaKnown RBP25.94■■□□□ 1.74
LIMS2-202ENST00000355119 PDLIM2Q96JY6 352 aa25.94■■□□□ 1.74
LIMS2-202ENST00000355119 TAF6LQ9Y6J9 622 aa25.94■■□□□ 1.74
LIMS2-202ENST00000355119 NDUFB9Q9Y6M9 179 aa25.94■■□□□ 1.74
LIMS2-202ENST00000355119 LETM1O95202 739 aaPredicted RBP25.93■■□□□ 1.74
LIMS2-202ENST00000355119 TCIRG1Q13488 830 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 HS1BP3Q53T59 392 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 HELLSQ9NRZ9 838 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 NEK1Q96PY6 1258 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 PAG1Q9NWQ8 432 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 TCHHQ07283 1943 aa25.93■■□□□ 1.74
LIMS2-202ENST00000355119 LARP1BQ659C4 914 aaKnown RBP25.92■■□□□ 1.74
LIMS2-202ENST00000355119 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
LIMS2-202ENST00000355119 VPS37CA5D8V6 355 aaPredicted RBP25.92■■□□□ 1.74
LIMS2-202ENST00000355119 TRIM28Q13263 835 aaKnown RBP25.92■■□□□ 1.74
LIMS2-202ENST00000355119 KLHL34Q8N239 644 aa25.92■■□□□ 1.74
LIMS2-202ENST00000355119 CCDC129Q6ZRS4 1044 aa25.91■■□□□ 1.74
LIMS2-202ENST00000355119 FBXO3Q9UK99 471 aa25.91■■□□□ 1.74
LIMS2-202ENST00000355119 SPEF2Q9C093 1822 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 FIBPO43427 364 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 LRRC24Q50LG9 513 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 KIF6Q6ZMV9 814 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.9■■□□□ 1.74
LIMS2-202ENST00000355119 TCEANC2Q96MN5 208 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 SEC62Q99442 399 aaKnown RBP25.9■■□□□ 1.74
LIMS2-202ENST00000355119 GOLIM4O00461 696 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 TIMM10P62072 90 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 COL9A3Q14050 684 aaPredicted RBP25.9■■□□□ 1.74
LIMS2-202ENST00000355119 ZSCAN30Q86W11 494 aa25.9■■□□□ 1.74
LIMS2-202ENST00000355119 CCDC9Q9Y3X0 531 aaKnown RBP25.89■■□□□ 1.74
LIMS2-202ENST00000355119 DNM1Q05193 864 aaKnown RBP25.88■■□□□ 1.73
LIMS2-202ENST00000355119 ZNF594Q96JF6 807 aaPredicted RBP25.88■■□□□ 1.73
LIMS2-202ENST00000355119 IFIT1P09914 478 aaKnown RBP25.88■■□□□ 1.73
LIMS2-202ENST00000355119 CCDC57Q2TAC2 916 aa25.88■■□□□ 1.73
LIMS2-202ENST00000355119 ZMYM1Q5SVZ6 1142 aa25.88■■□□□ 1.73
LIMS2-202ENST00000355119 DSCC1Q9BVC3 393 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms