RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PDGFDQ9GZP0 370 aaPredicted RBP24.96■■□□□ 1.59
SIGMAR1-202ENST00000353468 PTPN12Q05209 780 aaKnown RBP24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 CCDC57Q2TAC2 916 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 FAM161AQ3B820 660 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 PRR5LQ6MZQ0 368 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 CCDC24Q8N4L8 307 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 COPRSQ9NQ92 184 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 LAMB2P55268 1798 aa24.95■■□□□ 1.58
SIGMAR1-202ENST00000353468 MMP10P09238 476 aa24.94■■□□□ 1.58
SIGMAR1-202ENST00000353468 NUCB1Q02818 461 aa24.94■■□□□ 1.58
SIGMAR1-202ENST00000353468 HSP90AB4PQ58FF6 505 aa24.94■■□□□ 1.58
SIGMAR1-202ENST00000353468 KLHDC4Q8TBB5 520 aa24.94■■□□□ 1.58
SIGMAR1-202ENST00000353468 GREM2Q9H772 168 aa24.94■■□□□ 1.58
SIGMAR1-202ENST00000353468 IFIT5Q13325 482 aaKnown RBP24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 CCDC152Q4G0S7 254 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 SLC16A10Q8TF71 515 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 NLRP3Q96P20 1036 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 RAB11FIP3O75154 756 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 ST5P78524 1137 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 SF3B3Q15393 1217 aaKnown RBP24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 PARP3Q9Y6F1 533 aa24.93■■□□□ 1.58
SIGMAR1-202ENST00000353468 APBB1O00213 710 aa24.92■■□□□ 1.58
SIGMAR1-202ENST00000353468 ITGA6P23229 1130 aa24.92■■□□□ 1.58
SIGMAR1-202ENST00000353468 G3BP1Q13283 466 aaKnown RBP eCLIP24.92■■□□□ 1.58
SIGMAR1-202ENST00000353468 C3orf67Q6ZVT6 689 aa24.92■■□□□ 1.58
SIGMAR1-202ENST00000353468 CHD1LQ86WJ1 897 aa24.92■■□□□ 1.58
SIGMAR1-202ENST00000353468 ANKRD18BA2A2Z9 1011 aa24.91■■□□□ 1.58
SIGMAR1-202ENST00000353468 OS9Q13438 667 aaPredicted RBP24.91■■□□□ 1.58
SIGMAR1-202ENST00000353468 SIL1Q9H173 461 aa24.91■■□□□ 1.58
SIGMAR1-202ENST00000353468 ZBTB47Q9UFB7 747 aaPredicted RBP24.91■■□□□ 1.58
SIGMAR1-202ENST00000353468 ZNF594Q96JF6 807 aaPredicted RBP24.9■■□□□ 1.58
SIGMAR1-202ENST00000353468 TAF7LQ5H9L4 462 aa24.89■■□□□ 1.58
SIGMAR1-202ENST00000353468 SKAP1Q86WV1 359 aa24.89■■□□□ 1.58
SIGMAR1-202ENST00000353468 LRRCC1Q9C099 1032 aa24.89■■□□□ 1.58
SIGMAR1-202ENST00000353468 LNPKQ9C0E8 428 aa24.89■■□□□ 1.58
SIGMAR1-202ENST00000353468 RTL9Q8NET4 1388 aa24.89■■□□□ 1.58
SIGMAR1-202ENST00000353468 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
SIGMAR1-202ENST00000353468 KIF1BPQ96EK5 621 aa24.88■■□□□ 1.57
SIGMAR1-202ENST00000353468 RIC1Q4ADV7 1423 aa24.88■■□□□ 1.57
SIGMAR1-202ENST00000353468 ERC1Q8IUD2 1116 aa24.88■■□□□ 1.57
SIGMAR1-202ENST00000353468 RHPN1Q8TCX5 695 aa24.88■■□□□ 1.57
SIGMAR1-202ENST00000353468 SMARCA5O60264 1052 aaPredicted RBP24.87■■□□□ 1.57
SIGMAR1-202ENST00000353468 SEC31BQ9NQW1 1179 aa24.87■■□□□ 1.57
SIGMAR1-202ENST00000353468 NRXN2Q9P2S2 1712 aa24.87■■□□□ 1.57
SIGMAR1-202ENST00000353468 EYA2O00167 538 aa24.86■■□□□ 1.57
SIGMAR1-202ENST00000353468 FBXO3Q9UK99 471 aa24.86■■□□□ 1.57
SIGMAR1-202ENST00000353468 SASH1O94885 1247 aa24.85■■□□□ 1.57
SIGMAR1-202ENST00000353468 CIAO1O76071 339 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 LRRC24Q50LG9 513 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 PDE4AP27815 886 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 RGS3P49796 1198 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 LDHAL6AQ6ZMR3 332 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 ATG9AQ7Z3C6 839 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 CDC5LQ99459 802 aaKnown RBP24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 PUS3Q9BZE2 481 aaKnown RBP24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 BCL11AQ9H165 835 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 IL1RAPL2Q9NP60 686 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 CASZ1Q86V15 1759 aa24.84■■□□□ 1.57
SIGMAR1-202ENST00000353468 TNRC6CQ9HCJ0 1690 aaKnown RBP24.83■■□□□ 1.57
SIGMAR1-202ENST00000353468 IL15P40933 162 aaPredicted RBP24.83■■□□□ 1.57
SIGMAR1-202ENST00000353468 BRIP1Q9BX63 1249 aa24.83■■□□□ 1.57
SIGMAR1-202ENST00000353468 C16orf71Q8IYS4 520 aaPredicted RBP24.82■■□□□ 1.56
SIGMAR1-202ENST00000353468 KLRG2A4D1S0 409 aaPredicted RBP24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 ZBTB7AO95365 584 aa24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 IGHMBP2P38935 993 aaKnown RBP24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 CRY2Q49AN0 593 aa24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 DDX46Q7L014 1031 aaKnown RBP24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 CNNM1Q9NRU3 951 aa24.81■■□□□ 1.56
SIGMAR1-202ENST00000353468 ANKRD18AQ8IVF6 992 aa24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 MPHOSPH8Q99549 860 aa24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 MTFR1LQ9H019 292 aa24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 RIPOR2Q9Y4F9 1068 aa24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 PSDA5PKW4 1024 aaPredicted RBP24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 TFCP2Q12800 502 aa24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 CLASRPQ8N2M8 674 aaKnown RBP24.8■■□□□ 1.56
SIGMAR1-202ENST00000353468 RPGRQ92834 1020 aaKnown RBP24.79■■□□□ 1.56
SIGMAR1-202ENST00000353468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.79■■□□□ 1.56
SIGMAR1-202ENST00000353468 PDE6BP35913 854 aa24.78■■□□□ 1.56
SIGMAR1-202ENST00000353468 CELF1Q92879 486 aaKnown RBP24.78■■□□□ 1.56
SIGMAR1-202ENST00000353468 RPS8P62241 208 aaKnown RBP24.77■■□□□ 1.56
SIGMAR1-202ENST00000353468 ANKRD31Q8N7Z5 1873 aa24.77■■□□□ 1.56
SIGMAR1-202ENST00000353468 CEP126Q9P2H0 1117 aa24.77■■□□□ 1.56
SIGMAR1-202ENST00000353468 ATF5Q9Y2D1 282 aaPredicted RBP24.77■■□□□ 1.56
SIGMAR1-202ENST00000353468 OTUD7AQ8TE49 926 aaPredicted RBP24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 RBM17Q96I25 401 aaKnown RBP24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 TAF1P21675 1872 aa24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 LRP5O75197 1615 aa24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 GRAPQ13588 217 aa24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 METTL24Q5JXM2 366 aa24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 PLEKHM2Q8IWE5 1019 aa24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 GRAPLQ8TC17 118 aaPredicted RBP24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 BSDC1Q9NW68 430 aaPredicted RBP24.76■■□□□ 1.55
SIGMAR1-202ENST00000353468 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
SIGMAR1-202ENST00000353468 EAF2Q96CJ1 260 aaPredicted RBP24.75■■□□□ 1.55
SIGMAR1-202ENST00000353468 COL4A1P02462 1669 aa24.75■■□□□ 1.55
SIGMAR1-202ENST00000353468 MROH5Q6ZUA9 1318 aa24.74■■□□□ 1.55
SIGMAR1-202ENST00000353468 POLD1P28340 1107 aa24.74■■□□□ 1.55
SIGMAR1-202ENST00000353468 TNNI3KQ59H18 835 aa24.74■■□□□ 1.55
SIGMAR1-202ENST00000353468 AACSQ86V21 672 aa24.74■■□□□ 1.55
SIGMAR1-202ENST00000353468 GPR108Q9NPR9 543 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms