RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DDX27Q96GQ7 796 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 TRIM7Q9C029 511 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 CNPY2Q9Y2B0 182 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 PFDN1O60925 122 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 SLC3A2P08195 630 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 EXOSC9Q06265 439 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 SRLQ86TD4 932 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 VAV2P52735 878 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 CTAGE1Q96RT6 745 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 UTP14AQ9BVJ6 771 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 GOPCQ9HD26 462 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 TRAF1Q13077 416 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 RABGGTAQ92696 567 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 BIVM-ERCC5R4GMW8 1640 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 GOLGA6BA6NDN3 693 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 TTC36A6NLP5 189 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 WDHD1O75717 1129 aaPredicted RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 F13A1P00488 732 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 SSBP05455 408 aaKnown RBP eCLIP5.75□□□□□ -1.49
SKP1-202ENST00000353411 IQCA1Q86XH1 822 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 TEX11Q8IYF3 940 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.75□□□□□ -1.495e-16■□□□□ 9.1
SKP1-202ENST00000353411 ANKRD7Q92527 254 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 RPGRIP1Q96KN7 1286 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 GNAI2P04899 355 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 CCDC92Q53HC0 331 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 WDR78Q5VTH9 848 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 RPGRIP1LQ68CZ1 1315 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 SUPT6HQ7KZ85 1726 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 TMEM57Q8N5G2 664 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 ZBTB9Q96C00 473 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 JADE2Q9NQC1 790 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 DIAPH1O60610 1272 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 ATP2C2O75185 946 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 PNMA6AP0CW24 399 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 DYNC1I2Q13409 638 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 CCDC174Q6PII3 467 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 TAOK3Q9H2K8 898 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 ZMYM4Q5VZL5 1548 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 RALYLQ86SE5 291 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 CARD6Q9BX69 1037 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 BATF3Q9NR55 127 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 FHOD3Q2V2M9 1422 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 RAD54L2Q9Y4B4 1467 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 ELL2O00472 640 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 DESP17661 470 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 GJB2P29033 226 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 CDC25BP30305 580 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 NBPF9Q3BBW0 867 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 CEP63Q96MT8 703 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 GBP5Q96PP8 586 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 NUP88Q99567 741 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 DNAJC25Q9H1X3 360 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 LARSQ9P2J5 1176 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 CREB3O43889 395 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 HLTFQ14527 1009 aaKnown RBP eCLIP5.74□□□□□ -1.49
SKP1-202ENST00000353411 CCDC151A5D8V7 595 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 GOLGA8KD6RF30 607 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 PPP1R12BO60237 982 aaPredicted RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 CCT4P50991 539 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 RWDD2BP57060 319 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 RBM26Q5T8P6 1007 aaKnown RBP5.74□□□□□ -1.49
SKP1-202ENST00000353411 TTC22Q5TAA0 569 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 CCDC65Q8IXS2 484 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 CAPS2Q9BXY5 557 aa5.74□□□□□ -1.49
SKP1-202ENST00000353411 EVC2Q86UK5 1308 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CCHCR1Q8TD31 782 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 DACT1Q9NYF0 836 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CDKL5O76039 1030 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CNNM3Q8NE01 707 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 BCAS4Q8TDM0 211 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 TSC22D3Q99576 134 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 ACTR5Q9H9F9 607 aaPredicted RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 RIPOR2Q9Y4F9 1068 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CAMSAP2Q08AD1 1489 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 ADAMTS12P58397 1594 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CCDC160A6NGH7 325 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 MYO1BO43795 1136 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 RNF10Q8N5U6 811 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 CFAP57Q96MR6 1250 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CHCHD3Q9NX63 227 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 TTC41PQ6P2S7 1318 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CASKIN1Q8WXD9 1431 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 KIF21AQ7Z4S6 1674 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 URB2Q14146 1524 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 ERBINQ96RT1 1412 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 PSDA5PKW4 1024 aaPredicted RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 RHOXF2BP0C7M4 288 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 RHOXF2Q9BQY4 288 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 C1orf115Q9H7X2 142 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 FBXO38Q6PIJ6 1188 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CCDC155Q8N6L0 562 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 FSIP1Q8NA03 581 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CCDC57Q2TAC2 916 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.73□□□□□ -1.49
SKP1-202ENST00000353411 THOC2Q8NI27 1593 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms