RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 NFATC2IPQ8NCF5 419 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 CRACR2AQ9BSW2 395 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
PTPN11-201ENST00000351677 AK2P54819 239 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 PDE4BQ07343 736 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 ALG1Q9BT22 464 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 YEATS4O95619 227 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 KIF5BP33176 963 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 SYKP43405 635 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 WTAPQ15007 396 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 MSH6P52701 1360 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 MTIF2P46199 727 aaKnown RBP18.46■□□□□ 0.55
PTPN11-201ENST00000351677 DACT1Q9NYF0 836 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 ZBTB43O43298 467 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 JAKMIP3Q5VZ66 844 aa18.46■□□□□ 0.55
PTPN11-201ENST00000351677 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 CHST3Q7LGC8 479 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
PTPN11-201ENST00000351677 TDRD12Q587J7 1177 aaKnown RBP18.45■□□□□ 0.54
PTPN11-201ENST00000351677 IDEP14735 1019 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 GBP3Q9H0R5 595 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 MAP3K5Q99683 1374 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 SNW1Q13573 536 aaKnown RBP18.45■□□□□ 0.54
PTPN11-201ENST00000351677 HSP90AA4PQ58FG1 418 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 LINS1Q8NG48 757 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 ANKRD62A6NC57 917 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 ZFYP08048 801 aaPredicted RBP18.45■□□□□ 0.54
PTPN11-201ENST00000351677 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
PTPN11-201ENST00000351677 G2E3Q7L622 706 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
PTPN11-201ENST00000351677 IL15P40933 162 aaPredicted RBP18.44■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC152Q4G0S7 254 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 SLC4A4Q9Y6R1 1079 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 CYP7A1P22680 504 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
PTPN11-201ENST00000351677 TNIP1Q15025 636 aa18.44■□□□□ 0.54
PTPN11-201ENST00000351677 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
PTPN11-201ENST00000351677 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
PTPN11-201ENST00000351677 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 CHMLP26374 656 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 MARCKSP29966 332 aaPredicted RBP18.43■□□□□ 0.54
PTPN11-201ENST00000351677 UBA7P41226 1012 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
PTPN11-201ENST00000351677 ACSBG1Q96GR2 724 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTPN11-201ENST00000351677 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
PTPN11-201ENST00000351677 PAF1Q8N7H5 531 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 TTC41PQ6P2S7 1318 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 CREB3L3Q68CJ9 461 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 CALML4Q96GE6 196 aa18.43■□□□□ 0.54
PTPN11-201ENST00000351677 BAG3O95817 575 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-201ENST00000351677 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 AFMP43652 599 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 TFCP2Q12800 502 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 CEP135Q66GS9 1140 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 CUL5Q93034 780 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 POLR3GO15318 223 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-201ENST00000351677 MAP3K19Q56UN5 1328 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 KRT23Q9C075 422 aa18.42■□□□□ 0.54
PTPN11-201ENST00000351677 USO1O60763 962 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 CAVIN2O95810 425 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 KANK3Q6NY19 840 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 LDHCP07864 332 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 PRC1O43663 620 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 HOXC9P31274 260 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 TRMT1LQ7Z2T5 733 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 KCNG4Q8TDN1 519 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC12Q8WUD4 166 aaPredicted RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 MRPS27Q92552 414 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 BICC1Q9H694 974 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 YTHDC2Q9H6S0 1430 aaKnown RBP18.41■□□□□ 0.54
PTPN11-201ENST00000351677 RTN1Q16799 776 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 UBASH3AP57075 661 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC186Q7Z3E2 898 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 FAM200AQ8TCP9 573 aa18.41■□□□□ 0.54
PTPN11-201ENST00000351677 APOBRQ0VD83 1088 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
PTPN11-201ENST00000351677 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-201ENST00000351677 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 CPA1P15085 419 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 PKNOX2Q96KN3 472 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 ZSWIM4Q9H7M6 989 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms