RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
CDC42-202ENST00000344548 ITGA6P23229 1130 aa16.56■□□□□ 0.24
CDC42-202ENST00000344548 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
CDC42-202ENST00000344548 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
CDC42-202ENST00000344548 CHGBP05060 677 aa16.56■□□□□ 0.24
CDC42-202ENST00000344548 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
CDC42-202ENST00000344548 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
CDC42-202ENST00000344548 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
CDC42-202ENST00000344548 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
CDC42-202ENST00000344548 NTSR2O95665 410 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
CDC42-202ENST00000344548 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
CDC42-202ENST00000344548 GNPATO15228 680 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 PDE8AO60658 829 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 CIAO1O76071 339 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 PALD1Q9ULE6 856 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 LY75O60449 1722 aa16.54■□□□□ 0.24
CDC42-202ENST00000344548 REC8O95072 547 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
CDC42-202ENST00000344548 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 SH3TC1Q8TE82 1336 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 SGSM2O43147 1006 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 RPS6KA4O75676 772 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
CDC42-202ENST00000344548 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 MYH3P11055 1940 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
CDC42-202ENST00000344548 COL4A1P02462 1669 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 ATP5JP18859 108 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 BECN1Q14457 450 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 RC3H1Q5TC82 1133 aaKnown RBP16.52■□□□□ 0.24
CDC42-202ENST00000344548 TBC1D9BQ66K14 1250 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 EVI5LQ96CN4 794 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
CDC42-202ENST00000344548 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
CDC42-202ENST00000344548 TRIM37O94972 964 aa16.52■□□□□ 0.23
CDC42-202ENST00000344548 ADORA1P30542 326 aa16.52■□□□□ 0.23
CDC42-202ENST00000344548 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.23
CDC42-202ENST00000344548 ZNF609O15014 1411 aa16.51■□□□□ 0.23
CDC42-202ENST00000344548 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
CDC42-202ENST00000344548 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
CDC42-202ENST00000344548 LDHAL6AQ6ZMR3 332 aa16.51■□□□□ 0.23
CDC42-202ENST00000344548 ARHGEF1Q92888 912 aaKnown RBP16.51■□□□□ 0.23
CDC42-202ENST00000344548 ANP32EQ9BTT0 268 aa16.51■□□□□ 0.23
CDC42-202ENST00000344548 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
CDC42-202ENST00000344548 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
CDC42-202ENST00000344548 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 PHF14O94880 888 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
CDC42-202ENST00000344548 SNAP23O00161 211 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 DNAJC2Q99543 621 aaKnown RBP16.49■□□□□ 0.23
CDC42-202ENST00000344548 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
CDC42-202ENST00000344548 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 NMIQ13287 307 aaPredicted RBP16.49■□□□□ 0.23
CDC42-202ENST00000344548 SNX21Q969T3 373 aa16.49■□□□□ 0.23
CDC42-202ENST00000344548 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
CDC42-202ENST00000344548 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 PTH1RQ03431 593 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
CDC42-202ENST00000344548 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
CDC42-202ENST00000344548 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 PROM2Q8N271 834 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 HAUS7Q99871 368 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CDC42-202ENST00000344548 C4BP0C0L5 1744 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 SCARF1Q14162 830 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 NBR1Q14596 966 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
CDC42-202ENST00000344548 ABCC12Q96J65 1359 aa16.46■□□□□ 0.23
CDC42-202ENST00000344548 TAF1P21675 1872 aa16.46■□□□□ 0.23
CDC42-202ENST00000344548 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
CDC42-202ENST00000344548 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
CDC42-202ENST00000344548 HSCBQ8IWL3 235 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 GOLIM4O00461 696 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 RABEP1Q15276 862 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
CDC42-202ENST00000344548 AK7Q96M32 723 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms