RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 GCC2Q8IWJ2 1684 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 CACNA2D4Q7Z3S7 1137 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 FAM71BQ8TC56 605 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 GLRX3O76003 335 aaKnown RBP15.52■□□□□ 0.08
TRIO-202ENST00000344204 TERF2Q15554 542 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 ZMYM3Q14202 1370 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 FRMD3A2A2Y4 597 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 N4BP2L2Q92802 583 aaPredicted RBP15.52■□□□□ 0.08
TRIO-202ENST00000344204 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.08
TRIO-202ENST00000344204 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 RTL1A6NKG5 1358 aa15.52■□□□□ 0.08
TRIO-202ENST00000344204 IMPACTQ9P2X3 320 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 C9orf84Q5VXU9 1444 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 MAGEA9P43362 315 aa15.52■□□□□ 0.07
TRIO-202ENST00000344204 TACC1O75410 805 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 LMOD1P29536 600 aaPredicted RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 EFCAB2Q5VUJ9 269 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 STMN2Q93045 179 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 NAPGQ99747 312 aaPredicted RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 MYH15Q9Y2K3 1946 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 KANK3Q6NY19 840 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 N4BP3O15049 544 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 CYLC1P35663 651 aaPredicted RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 ERCC6LQ2NKX8 1250 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 SETDB1Q15047 1291 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 PPFIBP2Q8ND30 876 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 A0A1W2PRG0 241 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
TRIO-202ENST00000344204 TRIM7Q9C029 511 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 MAP7Q14244 749 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 CCDC102BQ68D86 513 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRIO-202ENST00000344204 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
TRIO-202ENST00000344204 DZIP1Q86YF9 867 aaKnown RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 DDX27Q96GQ7 796 aaKnown RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 SELENOSQ9BQE4 189 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 CARD6Q9BX69 1037 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 BAG1Q99933 345 aaPredicted RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 NCAPGQ9BPX3 1015 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 GEMIN8Q9NWZ8 242 aaKnown RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 PNMA8AQ86V59 439 aaPredicted RBP15.5■□□□□ 0.07
TRIO-202ENST00000344204 EXOC4Q96A65 974 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 SDSP20132 328 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
TRIO-202ENST00000344204 KIF1BPQ96EK5 621 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 CFAP58Q5T655 872 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 PPP1R12CQ9BZL4 782 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 NOL3O60936 208 aaKnown RBP15.49■□□□□ 0.07
TRIO-202ENST00000344204 GGT6Q6P531 493 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 KRT86O43790 486 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
TRIO-202ENST00000344204 FAM135AQ9P2D6 1515 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 ZBTB16Q05516 673 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 FAM160A1Q05DH4 1040 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 HOOK3Q86VS8 718 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 SELENOOQ9BVL4 669 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 DAPK1P53355 1430 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
TRIO-202ENST00000344204 DDX12PQ92771 950 aa15.49■□□□□ 0.07
TRIO-202ENST00000344204 TRIM21P19474 475 aaKnown RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 HMG20BQ9P0W2 317 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 A0A087WUV0 522 aaPredicted RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 IFI16Q16666 785 aaKnown RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 MYH7P12883 1935 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 MRFAP1L1Q96HT8 127 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 TTC5Q8N0Z6 440 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 ALDH3A1P30838 453 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
TRIO-202ENST00000344204 INTS8Q75QN2 995 aaKnown RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 LARP6Q9BRS8 491 aaKnown RBP15.48■□□□□ 0.07
TRIO-202ENST00000344204 PARD3Q8TEW0 1356 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 EFCAB8A8MWE9 144 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 CIB2O75838 187 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 MYO1CO00159 1063 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 MTIF2P46199 727 aaKnown RBP15.47■□□□□ 0.07
TRIO-202ENST00000344204 TSG101Q99816 390 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
TRIO-202ENST00000344204 ACTN2P35609 894 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 CCDC57Q2TAC2 916 aa15.47■□□□□ 0.07
TRIO-202ENST00000344204 IFT81Q8WYA0 676 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms