RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 NPHP1O15259 732 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 SYT1P21579 422 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 TRIM5Q9C035 493 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 FHOD1Q9Y613 1164 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 SCN11AQ9UI33 1791 aa18.13■□□□□ 0.49
LIMK2-203ENST00000340552 TNNT3P45378 269 aaPredicted RBP18.12■□□□□ 0.49
LIMK2-203ENST00000340552 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
LIMK2-203ENST00000340552 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 KDM6AO15550 1401 aaPredicted RBP18.12■□□□□ 0.49
LIMK2-203ENST00000340552 PDE1AP54750 535 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 DNM1Q05193 864 aaKnown RBP18.12■□□□□ 0.49
LIMK2-203ENST00000340552 TYRO3Q06418 890 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 NYAP1Q6ZVC0 841 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 CBX8Q9HC52 389 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
LIMK2-203ENST00000340552 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
LIMK2-203ENST00000340552 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
LIMK2-203ENST00000340552 TSHZ3Q63HK5 1081 aa18.11■□□□□ 0.49
LIMK2-203ENST00000340552 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
LIMK2-203ENST00000340552 H2AFXP16104 143 aaPredicted RBP18.1■□□□□ 0.49
LIMK2-203ENST00000340552 NOP2P46087 812 aaKnown RBP18.1■□□□□ 0.49
LIMK2-203ENST00000340552 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 CYP27B1O15528 508 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 PLA2G4AP47712 749 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 PTPN14Q15678 1187 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 CAMK4Q16566 473 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 OSBPL3Q9H4L5 887 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 YY1AP1Q9H869 796 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 RAD50Q92878 1312 aa18.1■□□□□ 0.49
LIMK2-203ENST00000340552 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 SLU7O95391 586 aaKnown RBP18.09■□□□□ 0.49
LIMK2-203ENST00000340552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.09■□□□□ 0.49
LIMK2-203ENST00000340552 RASSF4Q9H2L5 321 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 ANO6Q4KMQ2 910 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 SYT10Q6XYQ8 523 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
LIMK2-203ENST00000340552 COL5A2P05997 1499 aaPredicted RBP18.09■□□□□ 0.49
LIMK2-203ENST00000340552 ARID5BQ14865 1188 aa18.08■□□□□ 0.49
LIMK2-203ENST00000340552 MAP3K11Q16584 847 aa18.08■□□□□ 0.49
LIMK2-203ENST00000340552 TMX1Q9H3N1 280 aa18.08■□□□□ 0.49
LIMK2-203ENST00000340552 DTNBO60941 627 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 ANXA1P04083 346 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 PNMA6AP0CW24 399 aaPredicted RBP18.08■□□□□ 0.48
LIMK2-203ENST00000340552 CHMP3Q9Y3E7 222 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 N4BP2Q86UW6 1770 aaPredicted RBP18.08■□□□□ 0.48
LIMK2-203ENST00000340552 GNAI2P04899 355 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 SLC39A6Q13433 755 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
LIMK2-203ENST00000340552 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.48
LIMK2-203ENST00000340552 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
LIMK2-203ENST00000340552 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 GNAI3P08754 354 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 CLCN6P51797 869 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 ERCC6LQ2NKX8 1250 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 TRIM66O15016 1216 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
LIMK2-203ENST00000340552 CHMLP26374 656 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 LRRC8AQ8IWT6 810 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
LIMK2-203ENST00000340552 GEMIN8Q9NWZ8 242 aaKnown RBP18.07■□□□□ 0.48
LIMK2-203ENST00000340552 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 HMMRO75330 724 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 LIG1P18858 919 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 LRRN4CLQ8ND94 238 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
LIMK2-203ENST00000340552 POLR3GO15318 223 aaPredicted RBP18.05■□□□□ 0.48
LIMK2-203ENST00000340552 C10orf67Q8IYJ2 551 aa18.05■□□□□ 0.48
LIMK2-203ENST00000340552 TDRD7Q8NHU6 1098 aaKnown RBP18.05■□□□□ 0.48
LIMK2-203ENST00000340552 TRMT1Q9NXH9 659 aaKnown RBP18.05■□□□□ 0.48
LIMK2-203ENST00000340552 PI4KAP2A4QPH2 592 aa18.05■□□□□ 0.48
LIMK2-203ENST00000340552 GYS2P54840 703 aa18.05■□□□□ 0.48
LIMK2-203ENST00000340552 PI4KAP1Q8N8J0 262 aa18.05■□□□□ 0.48
LIMK2-203ENST00000340552 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
LIMK2-203ENST00000340552 ST5P78524 1137 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 IL25Q9H293 177 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 EXOC6BQ9Y2D4 811 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 MYO1CO00159 1063 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 EVA1CP58658 441 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 CARD10Q9BWT7 1032 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
LIMK2-203ENST00000340552 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
LIMK2-203ENST00000340552 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms