RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 SMIM5Q71RC9 77 aa7.89□□□□□ -1.15
ZNF28-201ENST00000339844 RTF1Q92541 710 aaKnown RBP7.89□□□□□ -1.15
ZNF28-201ENST00000339844 MARVELD3Q96A59 401 aa7.89□□□□□ -1.15
ZNF28-201ENST00000339844 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
ZNF28-201ENST00000339844 PRSS12P56730 875 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 TTLL12Q14166 644 aaPredicted RBP7.88□□□□□ -1.15
ZNF28-201ENST00000339844 SKOR2Q2VWA4 1001 aaPredicted RBP7.88□□□□□ -1.15
ZNF28-201ENST00000339844 ATF7IPQ6VMQ6 1270 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 ZNF496Q96IT1 587 aaPredicted RBP7.88□□□□□ -1.15
ZNF28-201ENST00000339844 TBC1D2Q9BYX2 928 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 C22orf23Q9BZE7 217 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 MIS18AQ9NYP9 233 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 C5P01031 1676 aa7.88□□□□□ -1.15
ZNF28-201ENST00000339844 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 C4BP0C0L5 1744 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 PNPLA7Q6ZV29 1317 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 FAM205CA6NFA0 338 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 PPP1R3GB7ZBB8 358 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 OATP04181 439 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 RLBP1P12271 317 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 MCM4P33991 863 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 RBM25P49756 843 aaKnown RBP7.87□□□□□ -1.15
ZNF28-201ENST00000339844 PDE4DQ08499 809 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 ZNF790Q6PG37 636 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 FTSJ3Q8IY81 847 aaKnown RBP7.87□□□□□ -1.15
ZNF28-201ENST00000339844 TUBGCP6Q96RT7 1819 aa7.87□□□□□ -1.15
ZNF28-201ENST00000339844 TJP1Q07157 1748 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 FSD2A1L4K1 749 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 PRAMEF22A3QJZ6 481 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 DDX11L8A8MPP1 907 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 TAF7Q15545 349 aaPredicted RBP7.86□□□□□ -1.15
ZNF28-201ENST00000339844 TTC5Q8N0Z6 440 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 GCC1Q96CN9 775 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 ZBTB40Q9NUA8 1239 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 TFCP2L1Q9NZI6 479 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
ZNF28-201ENST00000339844 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 CASZ1Q86V15 1759 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 UBR2Q8IWV8 1755 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 MYH14Q7Z406 1995 aaKnown RBP7.86□□□□□ -1.15
ZNF28-201ENST00000339844 ZNF831Q5JPB2 1677 aa7.86□□□□□ -1.15
ZNF28-201ENST00000339844 HEG1Q9ULI3 1381 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 CNTNAP4Q9C0A0 1308 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 GOLGA6L3A6NEY3 463 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 ZBTB7AO95365 584 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 COL9A1P20849 921 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 CRKLP46109 303 aaKnown RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 MRE11P49959 708 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 NUCB1Q02818 461 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 LMOD3Q0VAK6 560 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 PACS2Q86VP3 889 aa7.85□□□□□ -1.15
ZNF28-201ENST00000339844 COL23A1Q86Y22 540 aaPredicted RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 RBM46Q8TBY0 533 aaKnown RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 COL5A3P25940 1745 aaPredicted RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
ZNF28-201ENST00000339844 UBR3Q6ZT12 1888 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
ZNF28-201ENST00000339844 CYP19A1P11511 503 aaPredicted RBP7.84□□□□□ -1.15
ZNF28-201ENST00000339844 BMP2KLQ5H9B9 411 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 INTS5Q6P9B9 1019 aaKnown RBP7.84□□□□□ -1.15
ZNF28-201ENST00000339844 HSCBQ8IWL3 235 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 FMNL2Q96PY5 1086 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 SMC4Q9NTJ3 1288 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 TSPYL4Q9UJ04 414 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 ZBTB1Q9Y2K1 713 aa7.84□□□□□ -1.15
ZNF28-201ENST00000339844 QSER1Q2KHR3 1735 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 CHL1O00533 1208 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 ARHGAP33O14559 1287 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 TRIM27P14373 513 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 DDIT3P35638 169 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 EIF4A1P60842 406 aaKnown RBP7.83□□□□□ -1.16
ZNF28-201ENST00000339844 RC3H1Q5TC82 1133 aaKnown RBP7.83□□□□□ -1.16
ZNF28-201ENST00000339844 CLEC17AQ6ZS10 378 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 SSH1Q8WYL5 1049 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 CCDC87Q9NVE4 849 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 USP16Q9Y5T5 823 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 KDM3BQ7LBC6 1761 aa7.83□□□□□ -1.16
ZNF28-201ENST00000339844 TRAK2O60296 914 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 GIGYF1O75420 1035 aaPredicted RBP7.82□□□□□ -1.16
ZNF28-201ENST00000339844 A1BGP04217 495 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 SNRPA1P09661 255 aaKnown RBP7.82□□□□□ -1.16
ZNF28-201ENST00000339844 ZNF853P0CG23 659 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 SSFA2P28290 1259 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 PBX2P40425 430 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
ZNF28-201ENST00000339844 PSEN2P49810 448 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 GNAI1P63096 354 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 KRT24Q2M2I5 525 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 MSL1Q68DK7 614 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 GBP4Q96PP9 640 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 MTFR1LQ9H019 292 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 KDM4CQ9H3R0 1056 aa7.82□□□□□ -1.16
ZNF28-201ENST00000339844 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
ZNF28-201ENST00000339844 NOB1Q9ULX3 412 aaKnown RBP7.82□□□□□ -1.16
ZNF28-201ENST00000339844 RTCBQ9Y3I0 505 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms