RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TFCP2L1Q9NZI6 479 aa18.07■□□□□ 0.48
CBX3-201ENST00000337620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.07■□□□□ 0.48
CBX3-201ENST00000337620 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
CBX3-201ENST00000337620 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
CBX3-201ENST00000337620 HSP90B1P14625 803 aaKnown RBP18.06■□□□□ 0.48
CBX3-201ENST00000337620 ITGA6P23229 1130 aa18.06■□□□□ 0.48
CBX3-201ENST00000337620 AACSQ86V21 672 aa18.06■□□□□ 0.48
CBX3-201ENST00000337620 TNS1Q9HBL0 1735 aaKnown RBP18.06■□□□□ 0.48
CBX3-201ENST00000337620 TFCP2Q12800 502 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 ANKRD18BA2A2Z9 1011 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 EYA2O00167 538 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 NBPF5PQ86XG9 351 aaPredicted RBP18.05■□□□□ 0.48
CBX3-201ENST00000337620 STAP2Q9UGK3 403 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 MYH3P11055 1940 aa18.05■□□□□ 0.48
CBX3-201ENST00000337620 ATG9AQ7Z3C6 839 aa18.04■□□□□ 0.48
CBX3-201ENST00000337620 EAF2Q96CJ1 260 aaPredicted RBP18.04■□□□□ 0.48
CBX3-201ENST00000337620 PUS3Q9BZE2 481 aaKnown RBP18.04■□□□□ 0.48
CBX3-201ENST00000337620 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
CBX3-201ENST00000337620 IL15P40933 162 aaPredicted RBP18.04■□□□□ 0.48
CBX3-201ENST00000337620 EN1Q05925 392 aaPredicted RBP18.04■□□□□ 0.48
CBX3-201ENST00000337620 CCDC8Q9H0W5 538 aaPredicted RBP18.04■□□□□ 0.48
CBX3-201ENST00000337620 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
CBX3-201ENST00000337620 NPHP1O15259 732 aa18.02■□□□□ 0.48
CBX3-201ENST00000337620 MSH5O43196 834 aa18.02■□□□□ 0.48
CBX3-201ENST00000337620 CIAO1O76071 339 aa18.02■□□□□ 0.48
CBX3-201ENST00000337620 GYS1P13807 737 aa18.02■□□□□ 0.48
CBX3-201ENST00000337620 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
CBX3-201ENST00000337620 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
CBX3-201ENST00000337620 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
CBX3-201ENST00000337620 SDSP20132 328 aa18.02■□□□□ 0.47
CBX3-201ENST00000337620 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.47
CBX3-201ENST00000337620 NFIXQ14938 502 aa18.02■□□□□ 0.47
CBX3-201ENST00000337620 CCDC152Q4G0S7 254 aa18.02■□□□□ 0.47
CBX3-201ENST00000337620 SEC24BO95487 1268 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 TNNI3KQ59H18 835 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 FPGT-TNNI3KV9GXZ4 949 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
CBX3-201ENST00000337620 AOX1Q06278 1338 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 CAMKK2Q96RR4 588 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
CBX3-201ENST00000337620 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
CBX3-201ENST00000337620 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
CBX3-201ENST00000337620 TLR7Q9NYK1 1049 aaKnown RBP18■□□□□ 0.47
CBX3-201ENST00000337620 TTC41PQ6P2S7 1318 aa18■□□□□ 0.47
CBX3-201ENST00000337620 TRIM6-TRIM34B2RNG4 842 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 PI4K2BQ8TCG2 481 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 CEP126Q9P2H0 1117 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
CBX3-201ENST00000337620 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
CBX3-201ENST00000337620 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 ERC2O15083 957 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 CDC45O75419 566 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 NEUROD6Q96NK8 337 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 RGPD3A6NKT7 1758 aaPredicted RBP17.98■□□□□ 0.47
CBX3-201ENST00000337620 RGPD4Q7Z3J3 1758 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 LAMB2P55268 1798 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
CBX3-201ENST00000337620 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 NLRP3Q96P20 1036 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 RIPOR2Q9Y4F9 1068 aa17.98■□□□□ 0.47
CBX3-201ENST00000337620 GLRX3O76003 335 aaKnown RBP17.97■□□□□ 0.47
CBX3-201ENST00000337620 BAG6P46379 1132 aa17.97■□□□□ 0.47
CBX3-201ENST00000337620 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
CBX3-201ENST00000337620 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
CBX3-201ENST00000337620 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
CBX3-201ENST00000337620 TIMM10P62072 90 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 SF3B3Q15393 1217 aaKnown RBP17.96■□□□□ 0.47
CBX3-201ENST00000337620 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 MPHOSPH8Q99549 860 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 TM4SF1P30408 202 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 DBNDD2Q9BQY9 259 aa17.96■□□□□ 0.47
CBX3-201ENST00000337620 RTL9Q8NET4 1388 aa17.95■□□□□ 0.46
CBX3-201ENST00000337620 SERPINB2P05120 415 aa17.95■□□□□ 0.46
CBX3-201ENST00000337620 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
CBX3-201ENST00000337620 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
CBX3-201ENST00000337620 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
CBX3-201ENST00000337620 AKAP2Q9Y2D5 859 aa17.95■□□□□ 0.46
CBX3-201ENST00000337620 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
CBX3-201ENST00000337620 A0A1B0GUL7 405 aa17.94■□□□□ 0.46
CBX3-201ENST00000337620 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
CBX3-201ENST00000337620 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
CBX3-201ENST00000337620 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
CBX3-201ENST00000337620 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
CBX3-201ENST00000337620 SLC15A2Q16348 729 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
CBX3-201ENST00000337620 BOLA2Q9H3K6 86 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms