RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
RTN4-202ENST00000337526 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
RTN4-202ENST00000337526 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
RTN4-202ENST00000337526 MTIF2P46199 727 aaKnown RBP15.84■□□□□ 0.13
RTN4-202ENST00000337526 LINS1Q8NG48 757 aa15.84■□□□□ 0.13
RTN4-202ENST00000337526 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.13
RTN4-202ENST00000337526 DUOX2Q9NRD8 1548 aa15.83■□□□□ 0.13
RTN4-202ENST00000337526 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 TYRO3Q06418 890 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 TTC41PQ6P2S7 1318 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 N4BP3O15049 544 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 IDEP14735 1019 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 GTF2F1P35269 517 aaKnown RBP eCLIP15.83■□□□□ 0.12
RTN4-202ENST00000337526 VPS36Q86VN1 386 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
RTN4-202ENST00000337526 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
RTN4-202ENST00000337526 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
RTN4-202ENST00000337526 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
RTN4-202ENST00000337526 ZBTB43O43298 467 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 ANKIB1Q9P2G1 1089 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 ZHX1Q9UKY1 873 aaPredicted RBP15.82■□□□□ 0.12
RTN4-202ENST00000337526 PPIP5K1Q6PFW1 1433 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
RTN4-202ENST00000337526 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 TRERF1Q96PN7 1200 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 DNAI1Q9UI46 699 aa15.82■□□□□ 0.12
RTN4-202ENST00000337526 SOS1Q07889 1333 aaPredicted RBP15.81■□□□□ 0.12
RTN4-202ENST00000337526 ANKRD62A6NC57 917 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 SYT1P21579 422 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 AOPEPQ8N6M6 819 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 ZPR1O75312 459 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 KIF5BP33176 963 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
RTN4-202ENST00000337526 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
RTN4-202ENST00000337526 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 KIF20AO95235 890 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
RTN4-202ENST00000337526 PLCD4Q9BRC7 762 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 IL15P40933 162 aaPredicted RBP15.8■□□□□ 0.12
RTN4-202ENST00000337526 CREB3L3Q68CJ9 461 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 PYM1Q9BRP8 204 aaKnown RBP15.8■□□□□ 0.12
RTN4-202ENST00000337526 UQCRFS1P1P0C7P4 283 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 LMOD1P29536 600 aaPredicted RBP15.8■□□□□ 0.12
RTN4-202ENST00000337526 WTAPQ15007 396 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 CHRNA2Q15822 529 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 AKAP4Q5JQC9 854 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
RTN4-202ENST00000337526 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
RTN4-202ENST00000337526 WWC2Q6AWC2 1192 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 KRT222Q8N1A0 295 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 OTUD7AQ8TE49 926 aaPredicted RBP15.79■□□□□ 0.12
RTN4-202ENST00000337526 AMPD3Q01432 767 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 ATP2B3Q16720 1220 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 A0A1W2PP64 1363 aa15.79■□□□□ 0.12
RTN4-202ENST00000337526 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
RTN4-202ENST00000337526 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
RTN4-202ENST00000337526 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
RTN4-202ENST00000337526 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
RTN4-202ENST00000337526 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 SPTLC2O15270 562 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 EXOC5O00471 708 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 NBPF7P0C2Y1 421 aaPredicted RBP15.78■□□□□ 0.12
RTN4-202ENST00000337526 PDE4BQ07343 736 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
RTN4-202ENST00000337526 CCDC96Q2M329 555 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 TMTC2Q8N394 836 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 AFMP43652 599 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 CCDC178Q5BJE1 867 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 EYA1Q99502 592 aa15.78■□□□□ 0.12
RTN4-202ENST00000337526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.78■□□□□ 0.12
RTN4-202ENST00000337526 ZRSR2Q15696 482 aaKnown RBP15.77■□□□□ 0.12
RTN4-202ENST00000337526 SPECC1Q5M775 1068 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 SLC9C2Q5TAH2 1124 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 ALS2CR12Q96Q35 445 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 CCDC113Q9H0I3 377 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 TMOD2Q9NZR1 351 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 CEP170Q5SW79 1584 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 PTGS1P23219 599 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 HLTFQ14527 1009 aaKnown RBP eCLIP15.77■□□□□ 0.121e-8■■□□□ 13
RTN4-202ENST00000337526 ARFGAP3Q9NP61 516 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 JADE2Q9NQC1 790 aa15.77■□□□□ 0.12
RTN4-202ENST00000337526 FLT4P35916 1363 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 CPA1P15085 419 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 CETN2P41208 172 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 LMAN1P49257 510 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 RUFY3Q7L099 469 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 DYDC1Q8WWB3 177 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms