RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 NEURL1BA8MQ27 555 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 PSMA5P28066 241 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 SLC39A6Q13433 755 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 FSD1Q9BTV5 496 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 ZHX1Q9UKY1 873 aaPredicted RBP23.65■■□□□ 1.38
CDCA4-201ENST00000336219 MRVI1Q9Y6F6 885 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 MED23Q9ULK4 1368 aa23.65■■□□□ 1.38
CDCA4-201ENST00000336219 NPHP4O75161 1426 aaPredicted RBP23.64■■□□□ 1.38
CDCA4-201ENST00000336219 KLHDC4Q8TBB5 520 aa23.64■■□□□ 1.38
CDCA4-201ENST00000336219 NEXNQ0ZGT2 675 aa23.64■■□□□ 1.37
CDCA4-201ENST00000336219 KLHL34Q8N239 644 aa23.64■■□□□ 1.37
CDCA4-201ENST00000336219 KDM6AO15550 1401 aaPredicted RBP23.63■■□□□ 1.37
CDCA4-201ENST00000336219 TFIP11Q9UBB9 837 aaKnown RBP23.63■■□□□ 1.37
CDCA4-201ENST00000336219 MYL6BP14649 208 aa23.63■■□□□ 1.37
CDCA4-201ENST00000336219 TYRO3Q06418 890 aa23.63■■□□□ 1.37
CDCA4-201ENST00000336219 GCKRQ14397 625 aa23.63■■□□□ 1.37
CDCA4-201ENST00000336219 KRT28Q7Z3Y7 464 aa23.63■■□□□ 1.37
CDCA4-201ENST00000336219 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
CDCA4-201ENST00000336219 RNF20Q5VTR2 975 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 NUP62CLQ9H1M0 184 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 NPHP3Q7Z494 1330 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 JCADQ9P266 1359 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 EPHA10Q5JZY3 1008 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
CDCA4-201ENST00000336219 SPDYE4A6NLX3 237 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 KRT85P78386 507 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 LRMPQ12912 555 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 MAP3K11Q16584 847 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 BLOC1S2Q6QNY1 142 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 FAM200AQ8TCP9 573 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 METTL22Q9BUU2 404 aaPredicted RBP23.61■■□□□ 1.37
CDCA4-201ENST00000336219 NRBP1Q9UHY1 535 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 STK3Q13188 491 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 DACT1Q9NYF0 836 aa23.61■■□□□ 1.37
CDCA4-201ENST00000336219 KIF1AQ12756 1690 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 PDIA4P13667 645 aaKnown RBP23.6■■□□□ 1.37
CDCA4-201ENST00000336219 ZSCAN20P17040 1043 aaPredicted RBP23.6■■□□□ 1.37
CDCA4-201ENST00000336219 COPS6Q7L5N1 327 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 MYD88Q99836 296 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 ANO6Q4KMQ2 910 aa23.6■■□□□ 1.37
CDCA4-201ENST00000336219 RPS6KB1P23443 525 aa23.59■■□□□ 1.37
CDCA4-201ENST00000336219 ZNF589Q86UQ0 364 aaPredicted RBP23.59■■□□□ 1.37
CDCA4-201ENST00000336219 ALDH8A1Q9H2A2 487 aaPredicted RBP23.59■■□□□ 1.37
CDCA4-201ENST00000336219 CCDC186Q7Z3E2 898 aa23.59■■□□□ 1.37
CDCA4-201ENST00000336219 NFATC2IPQ8NCF5 419 aa23.59■■□□□ 1.37
CDCA4-201ENST00000336219 CBX8Q9HC52 389 aa23.59■■□□□ 1.37
CDCA4-201ENST00000336219 AFDNP55196 1824 aaKnown RBP23.58■■□□□ 1.37
CDCA4-201ENST00000336219 ZC3H6P61129 1189 aaKnown RBP23.58■■□□□ 1.37
CDCA4-201ENST00000336219 COPRSQ9NQ92 184 aa23.58■■□□□ 1.37
CDCA4-201ENST00000336219 ALS2Q96Q42 1657 aa23.58■■□□□ 1.37
CDCA4-201ENST00000336219 MST1RQ04912 1400 aa23.58■■□□□ 1.37
CDCA4-201ENST00000336219 PHKG2P15735 406 aa23.58■■□□□ 1.36
CDCA4-201ENST00000336219 TNMDQ9H2S6 317 aa23.58■■□□□ 1.36
CDCA4-201ENST00000336219 HMG20BQ9P0W2 317 aa23.58■■□□□ 1.36
CDCA4-201ENST00000336219 GOLGA6L6A8MZA4 724 aa23.57■■□□□ 1.36
CDCA4-201ENST00000336219 PDCP20941 246 aa23.57■■□□□ 1.36
CDCA4-201ENST00000336219 TOB2Q14106 344 aaPredicted RBP23.57■■□□□ 1.36
CDCA4-201ENST00000336219 TSGA10IPQ3SY00 556 aa23.57■■□□□ 1.36
CDCA4-201ENST00000336219 ZNF496Q96IT1 587 aaPredicted RBP23.57■■□□□ 1.36
CDCA4-201ENST00000336219 LRP10Q7Z4F1 713 aa23.57■■□□□ 1.36
CDCA4-201ENST00000336219 PDCL2Q8N4E4 241 aa23.57■■□□□ 1.36
CDCA4-201ENST00000336219 CHAF1AQ13111 956 aaPredicted RBP23.56■■□□□ 1.36
CDCA4-201ENST00000336219 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 DRC7Q8IY82 874 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 EDC3Q96F86 508 aaKnown RBP23.56■■□□□ 1.36
CDCA4-201ENST00000336219 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 TAF5LO75529 589 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 U2AF2P26368 475 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDCA4-201ENST00000336219 DMTNQ08495 405 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 NLRP2Q9NX02 1062 aa23.56■■□□□ 1.36
CDCA4-201ENST00000336219 DBNLQ9UJU6 430 aaKnown RBP23.56■■□□□ 1.36
CDCA4-201ENST00000336219 ATP5JP18859 108 aa23.55■■□□□ 1.36
CDCA4-201ENST00000336219 RFX5P48382 616 aaPredicted RBP23.55■■□□□ 1.36
CDCA4-201ENST00000336219 SPATA32Q96LK8 384 aa23.55■■□□□ 1.36
CDCA4-201ENST00000336219 TPM3P06753 285 aa23.55■■□□□ 1.36
CDCA4-201ENST00000336219 TATP17735 454 aaPredicted RBP23.55■■□□□ 1.36
CDCA4-201ENST00000336219 USPL1Q5W0Q7 1092 aa23.55■■□□□ 1.36
CDCA4-201ENST00000336219 C16orf45Q96MC5 204 aaPredicted RBP23.55■■□□□ 1.36
CDCA4-201ENST00000336219 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
CDCA4-201ENST00000336219 MEGF6O75095 1541 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 ELP1O95163 1332 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 PTPN12Q05209 780 aaKnown RBP23.54■■□□□ 1.36
CDCA4-201ENST00000336219 ARFGEF2Q9Y6D5 1785 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.54■■□□□ 1.36
CDCA4-201ENST00000336219 GOLGA6L4A6NEF3 574 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 NR1I2O75469 434 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 TNNI3KQ59H18 835 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 FPGT-TNNI3KV9GXZ4 949 aa23.54■■□□□ 1.36
CDCA4-201ENST00000336219 LEO1Q8WVC0 666 aaPredicted RBP23.53■■□□□ 1.36
CDCA4-201ENST00000336219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.53■■□□□ 1.36
CDCA4-201ENST00000336219 COL15A1P39059 1388 aa23.53■■□□□ 1.36
CDCA4-201ENST00000336219 JAK2O60674 1132 aa23.53■■□□□ 1.36
CDCA4-201ENST00000336219 TFCP2Q12800 502 aa23.53■■□□□ 1.36
CDCA4-201ENST00000336219 TRIM5Q9C035 493 aa23.53■■□□□ 1.36
CDCA4-201ENST00000336219 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
CDCA4-201ENST00000336219 RABL6Q3YEC7 729 aaPredicted RBP23.52■■□□□ 1.36
CDCA4-201ENST00000336219 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms