RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 UBE3BQ7Z3V4 1068 aa20.45■□□□□ 0.86
PDCD1-201ENST00000334409 AK7Q96M32 723 aa20.45■□□□□ 0.86
PDCD1-201ENST00000334409 CAMTA2O94983 1202 aa20.45■□□□□ 0.86
PDCD1-201ENST00000334409 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
PDCD1-201ENST00000334409 PRIMPOLQ96LW4 560 aa20.45■□□□□ 0.86
PDCD1-201ENST00000334409 RREB1Q92766 1687 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 RPS6KA4O75676 772 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 HMGN5P82970 282 aaKnown RBP20.44■□□□□ 0.86
PDCD1-201ENST00000334409 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 MYRIPQ8NFW9 859 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 SRP68Q9UHB9 627 aaKnown RBP20.44■□□□□ 0.86
PDCD1-201ENST00000334409 RTCBQ9Y3I0 505 aaKnown RBP20.44■□□□□ 0.86
PDCD1-201ENST00000334409 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 PLEKHM2Q8IWE5 1019 aa20.44■□□□□ 0.86
PDCD1-201ENST00000334409 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
PDCD1-201ENST00000334409 NUCB2P80303 420 aa20.43■□□□□ 0.86
PDCD1-201ENST00000334409 EN1Q05925 392 aaPredicted RBP20.43■□□□□ 0.86
PDCD1-201ENST00000334409 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
PDCD1-201ENST00000334409 C4BP0C0L5 1744 aa20.43■□□□□ 0.86
PDCD1-201ENST00000334409 PLSCR1O15162 318 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
PDCD1-201ENST00000334409 ZSCAN23Q3MJ62 389 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 RPAP2Q8IXW5 612 aaPredicted RBP20.42■□□□□ 0.86
PDCD1-201ENST00000334409 ARHGEF1Q92888 912 aaKnown RBP20.42■□□□□ 0.86
PDCD1-201ENST00000334409 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 NUP98P52948 1817 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 ERVV-1B6SEH8 477 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
PDCD1-201ENST00000334409 APBB1O00213 710 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 EPHA10Q5JZY3 1008 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 SSFA2P28290 1259 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.86
PDCD1-201ENST00000334409 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 FAM89AQ96GI7 184 aa20.41■□□□□ 0.86
PDCD1-201ENST00000334409 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
PDCD1-201ENST00000334409 ATP8B2P98198 1209 aa20.4■□□□□ 0.86
PDCD1-201ENST00000334409 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
PDCD1-201ENST00000334409 BICDL1Q6ZP65 573 aa20.4■□□□□ 0.86
PDCD1-201ENST00000334409 UTYO14607 1347 aa20.4■□□□□ 0.86
PDCD1-201ENST00000334409 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
PDCD1-201ENST00000334409 TNS1Q9HBL0 1735 aaKnown RBP20.4■□□□□ 0.86
PDCD1-201ENST00000334409 CD2BP2O95400 341 aaKnown RBP20.39■□□□□ 0.86
PDCD1-201ENST00000334409 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.86
PDCD1-201ENST00000334409 NLRP10Q86W26 655 aa20.39■□□□□ 0.86
PDCD1-201ENST00000334409 PRDM10Q9NQV6 1147 aa20.39■□□□□ 0.86
PDCD1-201ENST00000334409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.39■□□□□ 0.85
PDCD1-201ENST00000334409 KIAA2012Q0VF49 1180 aa20.39■□□□□ 0.85
PDCD1-201ENST00000334409 TRAPPC3LQ5T215 181 aa20.39■□□□□ 0.85
PDCD1-201ENST00000334409 DEFB132Q7Z7B7 95 aa20.39■□□□□ 0.85
PDCD1-201ENST00000334409 RBSNQ9H1K0 784 aa20.39■□□□□ 0.85
PDCD1-201ENST00000334409 H7C1W4 665 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 SRGAP3O43295 1099 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 CASP7P55210 303 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDCD1-201ENST00000334409 RABEP1Q15276 862 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 ZNF34Q8IZ26 560 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
PDCD1-201ENST00000334409 ZPR1O75312 459 aa20.37■□□□□ 0.85
PDCD1-201ENST00000334409 RFC4P35249 363 aa20.37■□□□□ 0.85
PDCD1-201ENST00000334409 SUSD4Q5VX71 490 aa20.36■□□□□ 0.85
PDCD1-201ENST00000334409 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
PDCD1-201ENST00000334409 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
PDCD1-201ENST00000334409 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
PDCD1-201ENST00000334409 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
PDCD1-201ENST00000334409 CAVIN1Q6NZI2 390 aaKnown RBP20.36■□□□□ 0.85
PDCD1-201ENST00000334409 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 BBXQ8WY36 941 aaPredicted RBP20.35■□□□□ 0.85
PDCD1-201ENST00000334409 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
PDCD1-201ENST00000334409 TFCP2L1Q9NZI6 479 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 HMMRO75330 724 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 CAMKK2Q96RR4 588 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 LMBRD1Q9NUN5 540 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
PDCD1-201ENST00000334409 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
PDCD1-201ENST00000334409 PA2G4Q9UQ80 394 aaKnown RBP20.34■□□□□ 0.85
PDCD1-201ENST00000334409 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
PDCD1-201ENST00000334409 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
PDCD1-201ENST00000334409 KLHDC4Q8TBB5 520 aa20.33■□□□□ 0.85
PDCD1-201ENST00000334409 USP26Q9BXU7 913 aa20.33■□□□□ 0.85
PDCD1-201ENST00000334409 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.85
PDCD1-201ENST00000334409 ANKRD36CQ5JPF3 1778 aa20.33■□□□□ 0.84
PDCD1-201ENST00000334409 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.84
PDCD1-201ENST00000334409 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.84
PDCD1-201ENST00000334409 FOXO4P98177 505 aa20.33■□□□□ 0.84
PDCD1-201ENST00000334409 LMBR1LQ6UX01 489 aa20.33■□□□□ 0.84
PDCD1-201ENST00000334409 NUTM1Q86Y26 1132 aa20.33■□□□□ 0.84
PDCD1-201ENST00000334409 UBR3Q6ZT12 1888 aa20.33■□□□□ 0.84
PDCD1-201ENST00000334409 PCCAP05165 728 aaPredicted RBP20.32■□□□□ 0.84
PDCD1-201ENST00000334409 SSH3Q8TE77 659 aa20.32■□□□□ 0.84
PDCD1-201ENST00000334409 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
PDCD1-201ENST00000334409 POLA2Q14181 598 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms