RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 PIBF1Q8WXW3 757 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 CCDC129Q6ZRS4 1044 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 MYD88Q99836 296 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 SIPA1L3O60292 1781 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-201ENST00000333371 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-201ENST00000333371 SEC62Q99442 399 aaKnown RBP14.66□□□□□ -0.06
VPS33B-201ENST00000333371 KCNF1Q9H3M0 494 aa14.66□□□□□ -0.06
VPS33B-201ENST00000333371 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS33B-201ENST00000333371 COL15A1P39059 1388 aa14.66□□□□□ -0.06
VPS33B-201ENST00000333371 COL18A1P39060 1754 aa14.66□□□□□ -0.06
VPS33B-201ENST00000333371 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
VPS33B-201ENST00000333371 JAK2O60674 1132 aa14.66□□□□□ -0.06
VPS33B-201ENST00000333371 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
VPS33B-201ENST00000333371 C5P01031 1676 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 SLFNL1Q499Z3 407 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 COPS6Q7L5N1 327 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 DDX11Q96FC9 970 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 LRRC2Q9BYS8 371 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 PYCARDQ9ULZ3 195 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 PHKG2P15735 406 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 LUZP1Q86V48 1076 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 MEGF6O75095 1541 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 SCN11AQ9UI33 1791 aa14.65□□□□□ -0.06
VPS33B-201ENST00000333371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
VPS33B-201ENST00000333371 NEURL1BA8MQ27 555 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 KRT85P78386 507 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 NFATC2IPQ8NCF5 419 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 DYNC1I1O14576 645 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 PPFIA3O75145 1194 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
VPS33B-201ENST00000333371 FOSBP53539 338 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 DACT1Q9NYF0 836 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.07
VPS33B-201ENST00000333371 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
VPS33B-201ENST00000333371 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
VPS33B-201ENST00000333371 UTYO14607 1347 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 ZNF790Q6PG37 636 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 ATP5J2-PTCD1G3V325 749 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
VPS33B-201ENST00000333371 TAF5LO75529 589 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 PSMA5P28066 241 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 TFCP2Q12800 502 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 GCKRQ14397 625 aa14.63□□□□□ -0.07
VPS33B-201ENST00000333371 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
VPS33B-201ENST00000333371 CCDC192P0DO97 292 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 NUP62CLQ9H1M0 184 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 PRDM11Q9NQV5 511 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 USP16Q9Y5T5 823 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-201ENST00000333371 ABCC6O95255 1503 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 ZNF496Q96IT1 587 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-201ENST00000333371 CPDO75976 1380 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 HIP1O00291 1037 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 TYRO3Q06418 890 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 RNF20Q5VTR2 975 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 UBE3BQ7Z3V4 1068 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 MYRIPQ8NFW9 859 aa14.62□□□□□ -0.07
VPS33B-201ENST00000333371 STRCQ7RTU9 1775 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
VPS33B-201ENST00000333371 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
VPS33B-201ENST00000333371 SPATA32Q96LK8 384 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-201ENST00000333371 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 ANO6Q4KMQ2 910 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-201ENST00000333371 DCAF5Q96JK2 942 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 SNRKQ9NRH2 765 aa14.61□□□□□ -0.07
VPS33B-201ENST00000333371 NR1I2O75469 434 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 PTGS1P23219 599 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 PGBD1Q96JS3 809 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 TNMDQ9H2S6 317 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 AFDNP55196 1824 aaKnown RBP14.6□□□□□ -0.07
VPS33B-201ENST00000333371 ZNF609O15014 1411 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 GOLGA6L4A6NEF3 574 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
VPS33B-201ENST00000333371 Q6ZUG5 572 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
VPS33B-201ENST00000333371 A0A0G2JLW4 131 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 CYP27B1O15528 508 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
VPS33B-201ENST00000333371 TNNI3KQ59H18 835 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 TOM1L2Q6ZVM7 507 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 FAM200AQ8TCP9 573 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 BRF1Q92994 677 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 METTL22Q9BUU2 404 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-201ENST00000333371 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms