RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.26
ATP2C1-201ENST00000328560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 UTYO14607 1347 aa16.7■□□□□ 0.26
ATP2C1-201ENST00000328560 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 SPC24Q8NBT2 197 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 JAK2O60674 1132 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 UQCRHP07919 91 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 RRP9O43818 475 aaKnown RBP16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 TAF5LO75529 589 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
ATP2C1-201ENST00000328560 TMEM94Q12767 1356 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 CEBPZQ03701 1054 aaKnown RBP16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 KCNB2Q92953 911 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 C1orf167Q5SNV9 1468 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 CYP27B1O15528 508 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 LIG1P18858 919 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 PDCP20941 246 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 MCM5P33992 734 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
ATP2C1-201ENST00000328560 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
ATP2C1-201ENST00000328560 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
ATP2C1-201ENST00000328560 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
ATP2C1-201ENST00000328560 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
ATP2C1-201ENST00000328560 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
ATP2C1-201ENST00000328560 H3BQV1 296 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 GOLIM4O00461 696 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 KDM4AO75164 1064 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 TIMM10P62072 90 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 Q6ZUG5 572 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 ATP5JP18859 108 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
ATP2C1-201ENST00000328560 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 BRF1Q92994 677 aa16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
ATP2C1-201ENST00000328560 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 HSPA2P54652 639 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 TNMDQ9H2S6 317 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 ZNF594Q96JF6 807 aaPredicted RBP16.64■□□□□ 0.25
ATP2C1-201ENST00000328560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■□□ 15.2
ATP2C1-201ENST00000328560 CYP21A2P08686 494 aa16.63■□□□□ 0.25
ATP2C1-201ENST00000328560 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
ATP2C1-201ENST00000328560 EVA1CP58658 441 aa16.63■□□□□ 0.25
ATP2C1-201ENST00000328560 KRT32Q14532 448 aa16.63■□□□□ 0.25
ATP2C1-201ENST00000328560 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
ATP2C1-201ENST00000328560 AP5Z1O43299 807 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 A1BGP04217 495 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 LUZP1Q86V48 1076 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 MEGF6O75095 1541 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 COL15A1P39059 1388 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
ATP2C1-201ENST00000328560 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 LEO1Q8WVC0 666 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 TYRO3Q06418 890 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
ATP2C1-201ENST00000328560 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 HAUS7Q99871 368 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 A0A0G2JLW4 131 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 ZNF609O15014 1411 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
ATP2C1-201ENST00000328560 FKBP4Q02790 459 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms