RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 YEATS4O95619 227 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 NEMFO60524 1076 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 ZFYVE9O95405 1425 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 KCNA6P17658 529 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 TAX1BP1Q86VP1 789 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 STX1AQ16623 288 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 EYA1Q99502 592 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 ZNF804AQ7Z570 1209 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 IP6K1Q92551 441 aa13.78□□□□□ -0.2
AMBRA1-201ENST00000314845 ZMYM3Q14202 1370 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 UBE2HP62256 183 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 TDRD12Q587J7 1177 aaKnown RBP13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 KIF18AQ8NI77 898 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 TESK2Q96S53 571 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
AMBRA1-201ENST00000314845 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 GSDMDP57764 484 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 VAMP4O75379 141 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 KIAA0754O94854 1291 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 PLCG2P16885 1265 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 RTN1Q16799 776 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 GBP2P32456 591 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 GNAT2P19087 354 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 SAMM50Q9Y512 469 aa13.76□□□□□ -0.21
AMBRA1-201ENST00000314845 ZNF165P49910 485 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 MAP3K19Q56UN5 1328 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 ABCC1P33527 1531 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 BIN1O00499 593 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 UQCRHP07919 91 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 PDCL2Q8N4E4 241 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
AMBRA1-201ENST00000314845 HOXC9P31274 260 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 RMND1Q9NWS8 449 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 TBCAO75347 108 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 PIK3C2GO75747 1445 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 EIF2AK4Q9P2K8 1649 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 HSPA2P54652 639 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 SYCP3Q8IZU3 236 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 DCTPP1Q9H773 170 aa13.74□□□□□ -0.21
AMBRA1-201ENST00000314845 FAM193AP78312 1265 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms