RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 TAF5LO75529 589 aa27.16■■□□□ 1.94
SIAH2-201ENST00000312960 NECAB1Q8N987 351 aa27.16■■□□□ 1.94
SIAH2-201ENST00000312960 BLOC1S2Q6QNY1 142 aa27.15■■□□□ 1.94
SIAH2-201ENST00000312960 RNF214Q8ND24 703 aa27.15■■□□□ 1.94
SIAH2-201ENST00000312960 NAP1L5Q96NT1 182 aaPredicted RBP27.15■■□□□ 1.94
SIAH2-201ENST00000312960 HMG20BQ9P0W2 317 aa27.15■■□□□ 1.94
SIAH2-201ENST00000312960 USPL1Q5W0Q7 1092 aa27.14■■□□□ 1.94
SIAH2-201ENST00000312960 TAF6LQ9Y6J9 622 aa27.14■■□□□ 1.94
SIAH2-201ENST00000312960 PARP4Q9UKK3 1724 aaKnown RBP27.14■■□□□ 1.94
SIAH2-201ENST00000312960 LAMB4A4D0S4 1761 aa27.14■■□□□ 1.93
SIAH2-201ENST00000312960 NBPF26B4DH59 902 aa27.14■■□□□ 1.93
SIAH2-201ENST00000312960 RPS6KB1P23443 525 aa27.14■■□□□ 1.93
SIAH2-201ENST00000312960 NBPF14Q5TI25 921 aa27.14■■□□□ 1.93
SIAH2-201ENST00000312960 NBPF10Q6P3W6 841 aaKnown RBP27.14■■□□□ 1.93
SIAH2-201ENST00000312960 NBPF15Q8N660 670 aa27.14■■□□□ 1.93
SIAH2-201ENST00000312960 ANKRD1Q15327 319 aa27.13■■□□□ 1.93
SIAH2-201ENST00000312960 CCDC183Q5T5S1 534 aa27.13■■□□□ 1.93
SIAH2-201ENST00000312960 DTNBO60941 627 aa27.13■■□□□ 1.93
SIAH2-201ENST00000312960 NOL7Q9UMY1 257 aaKnown RBP27.13■■□□□ 1.93
SIAH2-201ENST00000312960 H7C1W4 665 aa27.12■■□□□ 1.93
SIAH2-201ENST00000312960 RFX7Q2KHR2 1363 aa27.12■■□□□ 1.93
SIAH2-201ENST00000312960 PDIA4P13667 645 aaKnown RBP27.12■■□□□ 1.93
SIAH2-201ENST00000312960 MSNP26038 577 aaKnown RBP27.12■■□□□ 1.93
SIAH2-201ENST00000312960 LMBR1LQ6UX01 489 aa27.12■■□□□ 1.93
SIAH2-201ENST00000312960 DBNDD2Q9BQY9 259 aa27.12■■□□□ 1.93
SIAH2-201ENST00000312960 FOXO4P98177 505 aa27.11■■□□□ 1.93
SIAH2-201ENST00000312960 HAUS7Q99871 368 aa27.11■■□□□ 1.93
SIAH2-201ENST00000312960 FIBPO43427 364 aa27.11■■□□□ 1.93
SIAH2-201ENST00000312960 LETM1O95202 739 aaPredicted RBP27.1■■□□□ 1.93
SIAH2-201ENST00000312960 DNM1Q05193 864 aaKnown RBP27.1■■□□□ 1.93
SIAH2-201ENST00000312960 CSPP1Q1MSJ5 1256 aa27.1■■□□□ 1.93
SIAH2-201ENST00000312960 TOB2Q14106 344 aaPredicted RBP27.1■■□□□ 1.93
SIAH2-201ENST00000312960 ZCRB1Q8TBF4 217 aaKnown RBP27.1■■□□□ 1.93
SIAH2-201ENST00000312960 PCDH11XQ9BZA7 1347 aa27.09■■□□□ 1.93
SIAH2-201ENST00000312960 PCDH11YQ9BZA8 1340 aa27.09■■□□□ 1.93
SIAH2-201ENST00000312960 TCEANC2Q96MN5 208 aa27.09■■□□□ 1.93
SIAH2-201ENST00000312960 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.09■■□□□ 1.93
SIAH2-201ENST00000312960 NDUFB9Q9Y6M9 179 aa27.09■■□□□ 1.93
SIAH2-201ENST00000312960 WDR17Q8IZU2 1322 aa27.08■■□□□ 1.93
SIAH2-201ENST00000312960 ERVV-2B6SEH9 535 aa27.08■■□□□ 1.93
SIAH2-201ENST00000312960 LARP1BQ659C4 914 aaKnown RBP27.08■■□□□ 1.93
SIAH2-201ENST00000312960 VPS37CA5D8V6 355 aaPredicted RBP27.08■■□□□ 1.92
SIAH2-201ENST00000312960 TTLL7Q6ZT98 887 aa27.08■■□□□ 1.92
SIAH2-201ENST00000312960 FAM184AQ8NB25 1140 aa27.08■■□□□ 1.92
SIAH2-201ENST00000312960 KRT32Q14532 448 aa27.07■■□□□ 1.92
SIAH2-201ENST00000312960 ZNF609O15014 1411 aa27.07■■□□□ 1.92
SIAH2-201ENST00000312960 DNAJC2Q99543 621 aaKnown RBP27.07■■□□□ 1.92
SIAH2-201ENST00000312960 CWC25Q9NXE8 425 aaPredicted RBP27.06■■□□□ 1.92
SIAH2-201ENST00000312960 ATG9AQ7Z3C6 839 aa27.06■■□□□ 1.92
SIAH2-201ENST00000312960 KLHL34Q8N239 644 aa27.06■■□□□ 1.92
SIAH2-201ENST00000312960 PDCP20941 246 aa27.05■■□□□ 1.92
SIAH2-201ENST00000312960 NKX1-1Q15270 411 aaPredicted RBP27.05■■□□□ 1.92
SIAH2-201ENST00000312960 UVSSAQ2YD98 709 aa27.05■■□□□ 1.92
SIAH2-201ENST00000312960 MCMDC2Q4G0Z9 681 aa27.05■■□□□ 1.92
SIAH2-201ENST00000312960 TOM1L2Q6ZVM7 507 aa27.05■■□□□ 1.92
SIAH2-201ENST00000312960 PRDM11Q9NQV5 511 aa27.05■■□□□ 1.92
SIAH2-201ENST00000312960 CHGBP05060 677 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 CCDC39Q9UFE4 941 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 U3KPZ7 1027 aaPredicted RBP27.04■■□□□ 1.92
SIAH2-201ENST00000312960 UBR2Q8IWV8 1755 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 A1BGP04217 495 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 KBTBD3Q8NAB2 608 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 SEC62Q99442 399 aaKnown RBP27.04■■□□□ 1.92
SIAH2-201ENST00000312960 GPR108Q9NPR9 543 aa27.04■■□□□ 1.92
SIAH2-201ENST00000312960 ZNF500O60304 480 aaPredicted RBP27.03■■□□□ 1.92
SIAH2-201ENST00000312960 NEK1Q96PY6 1258 aa27.03■■□□□ 1.92
SIAH2-201ENST00000312960 ZKSCAN5Q9Y2L8 839 aa27.03■■□□□ 1.92
SIAH2-201ENST00000312960 CHMP3Q9Y3E7 222 aa27.03■■□□□ 1.92
SIAH2-201ENST00000312960 CCDC129Q6ZRS4 1044 aa27.03■■□□□ 1.92
SIAH2-201ENST00000312960 DDX46Q7L014 1031 aaKnown RBP27.03■■□□□ 1.92
SIAH2-201ENST00000312960 KCPQ6ZWJ8 1503 aa27.02■■□□□ 1.92
SIAH2-201ENST00000312960 OFD1O75665 1012 aa27.02■■□□□ 1.92
SIAH2-201ENST00000312960 MCM5P33992 734 aa27.02■■□□□ 1.92
SIAH2-201ENST00000312960 CDC37L1Q7L3B6 337 aa27.02■■□□□ 1.92
SIAH2-201ENST00000312960 NUP188Q5SRE5 1749 aa27.02■■□□□ 1.92
SIAH2-201ENST00000312960 TPRNQ4KMQ1 711 aa27.01■■□□□ 1.92
SIAH2-201ENST00000312960 CCDC191Q8NCU4 936 aa27.01■■□□□ 1.92
SIAH2-201ENST00000312960 SH3TC1Q8TE82 1336 aa27■■□□□ 1.91
SIAH2-201ENST00000312960 CYP21A2P08686 494 aa27■■□□□ 1.91
SIAH2-201ENST00000312960 IL15P40933 162 aaPredicted RBP27■■□□□ 1.91
SIAH2-201ENST00000312960 TICAM2Q86XR7 235 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 FUCA2Q9BTY2 467 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 COL5A2P05997 1499 aaPredicted RBP26.99■■□□□ 1.91
SIAH2-201ENST00000312960 KRT85P78386 507 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 NEUROD6Q96NK8 337 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 NHSL1Q5SYE7 1610 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 PALLDQ8WX93 1383 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 TJP1Q07157 1748 aa26.99■■□□□ 1.91
SIAH2-201ENST00000312960 TIMM10P62072 90 aa26.98■■□□□ 1.91
SIAH2-201ENST00000312960 ZBTB3Q9H5J0 574 aa26.98■■□□□ 1.91
SIAH2-201ENST00000312960 IL2RBP14784 551 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 STK3Q13188 491 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 TTC6Q86TZ1 520 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 FERMT3Q86UX7 667 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 GTF3C6Q969F1 213 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 CARD10Q9BWT7 1032 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 PAG1Q9NWQ8 432 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 PAPPAQ13219 1627 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 ELP1O95163 1332 aa26.97■■□□□ 1.91
SIAH2-201ENST00000312960 EYA2O00167 538 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms