RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 LUZP1Q86V48 1076 aa22.39■■□□□ 1.17
HERPUD2-201ENST00000311350 NUTM1Q86Y26 1132 aa22.39■■□□□ 1.17
HERPUD2-201ENST00000311350 KDM3BQ7LBC6 1761 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 GOLGA6L6A8MZA4 724 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 MAP4K4O95819 1239 aaPredicted RBP22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 TPM3P06753 285 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 TNNT1P13805 278 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 CPA1P15085 419 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 CAMK4Q16566 473 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 BEND3Q5T5X7 828 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 KCNB2Q92953 911 aa22.38■■□□□ 1.17
HERPUD2-201ENST00000311350 GLRX3O76003 335 aaKnown RBP22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 EIF4A1P60842 406 aaKnown RBP22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 TAF3Q5VWG9 929 aa22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 RUFY2Q8WXA3 655 aa22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 AK2P54819 239 aa22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 TM6SF1Q9BZW5 370 aa22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 NAP1L2Q9ULW6 460 aaPredicted RBP22.37■■□□□ 1.17
HERPUD2-201ENST00000311350 SRGAP3O43295 1099 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 LARGE1O95461 756 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 PDIA4P13667 645 aaKnown RBP22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 GABPB1Q06547 395 aaPredicted RBP22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 RUFY3Q7L099 469 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 SMTNL1A8MU46 457 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 KCNJ4P48050 445 aa22.36■■□□□ 1.17
HERPUD2-201ENST00000311350 KIF18AQ8NI77 898 aa22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 HDAC5Q9UQL6 1122 aa22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 DRC7Q8IY82 874 aa22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 CARD10Q9BWT7 1032 aa22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 V9GYY5 206 aaPredicted RBP22.35■■□□□ 1.17
HERPUD2-201ENST00000311350 CCDC192P0DO97 292 aa22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 RASEFQ8IZ41 740 aa22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 MORC2Q9Y6X9 1032 aaPredicted RBP22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 IRX5P78411 483 aaPredicted RBP22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 ZNF592Q92610 1267 aa22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 SH2B1Q9NRF2 756 aaPredicted RBP22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 ERBB3P21860 1342 aa22.34■■□□□ 1.17
HERPUD2-201ENST00000311350 TERF2Q15554 542 aa22.33■■□□□ 1.17
HERPUD2-201ENST00000311350 MRVI1Q9Y6F6 885 aa22.33■■□□□ 1.17
HERPUD2-201ENST00000311350 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.16
HERPUD2-201ENST00000311350 VPS53Q5VIR6 699 aa22.33■■□□□ 1.16
HERPUD2-201ENST00000311350 RGPD5Q99666 1765 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 FAM196AQ6ZSG2 479 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 ERC1Q8IUD2 1116 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 CKAP2LQ8IYA6 745 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 FAM200AQ8TCP9 573 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 IP6K1Q92551 441 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 LTN1O94822 1766 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 ALDH1L1O75891 902 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 CCDC112Q8NEF3 446 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 ST7Q9NRC1 585 aa22.32■■□□□ 1.16
HERPUD2-201ENST00000311350 SYCP1Q15431 976 aa22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 CCDC83Q8IWF9 413 aa22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 MTMR6Q9Y217 621 aa22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 NBPF7P0C2Y1 421 aaPredicted RBP22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 LIG1P18858 919 aa22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 GPATCH3Q96I76 525 aa22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
HERPUD2-201ENST00000311350 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 PARP4Q9UKK3 1724 aaKnown RBP22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 ERICH4A6NGS2 130 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 GJB2P29033 226 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 TYRO3Q06418 890 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 KMT5BQ4FZB7 885 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 FAM173BQ6P4H8 233 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 ANKRD24Q8TF21 1146 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 TPD52L1Q16890 204 aaPredicted RBP22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 CBX8Q9HC52 389 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 ZSWIM6Q9HCJ5 1215 aa22.3■■□□□ 1.16
HERPUD2-201ENST00000311350 ADCY9O60503 1353 aa22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 DDB1Q16531 1140 aa22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 CLASRPQ8N2M8 674 aaKnown RBP22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 CACTINQ8WUQ7 758 aaKnown RBP22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 VPS37CA5D8V6 355 aaPredicted RBP22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 NLRP2Q9NX02 1062 aa22.29■■□□□ 1.16
HERPUD2-201ENST00000311350 PI4KAP2A4QPH2 592 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 CCDC144BQ3MJ40 725 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 ANO6Q4KMQ2 910 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 PI4KAP1Q8N8J0 262 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 TRIM5Q9C035 493 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 USP27XA6NNY8 438 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 HIP1O00291 1037 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 BAG6P46379 1132 aa22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 DDX54Q8TDD1 881 aaKnown RBP22.28■■□□□ 1.16
HERPUD2-201ENST00000311350 SNRKQ9NRH2 765 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms