RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 SYCE3A1L190 88 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 STARD3NLO95772 234 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 UQCRHP07919 91 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 PDE1AP54750 535 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 ZBTB1Q9Y2K1 713 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 LRP6O75581 1613 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 BARGINQ6ZT62 677 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 MCCP23508 829 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 VPS72Q15906 364 aa12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-201ENST00000308521 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 NEK4P51957 841 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 UBR2Q8IWV8 1755 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 HLFQ16534 295 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 TSPY26PQ9H489 355 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
APOBEC3F-201ENST00000308521 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 GPTP24298 496 aa12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 UTYO14607 1347 aa12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 MX1P20591 662 aa12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 TEX13AQ9BXU3 409 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-201ENST00000308521 PHF14O94880 888 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 UVSSAQ2YD98 709 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 SMIM5Q71RC9 77 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 MTX1Q13505 466 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 RILPL2Q969X0 211 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 PAPPAQ13219 1627 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 LOC102724428A0A0B4J2F2 783 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 SIK1P57059 783 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 ITPK1Q13572 414 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 KIF1BPQ96EK5 621 aa12.34□□□□□ -0.43
APOBEC3F-201ENST00000308521 AFF2P51816 1311 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 SASH1O94885 1247 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 CASP7P55210 303 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 LAMB4A4D0S4 1761 aa12.33□□□□□ -0.44
APOBEC3F-201ENST00000308521 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 H7C1W4 665 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 CHMLP26374 656 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 HDAC5Q9UQL6 1122 aa12.32□□□□□ -0.44
APOBEC3F-201ENST00000308521 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 AOX1Q06278 1338 aa12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 WDR33Q9C0J8 1336 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 FOXO4P98177 505 aa12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3F-201ENST00000308521 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 AACSQ86V21 672 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 CLASRPQ8N2M8 674 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 PTMAP06454 111 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 HSP90AB4PQ58FF6 505 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms