RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PER1O15534 1290 aaPredicted RBP15.81■□□□□ 0.12
SMIM4-201ENST00000307106 NTSR2O95665 410 aa15.81■□□□□ 0.12
SMIM4-201ENST00000307106 TTLL7Q6ZT98 887 aa15.81■□□□□ 0.12
SMIM4-201ENST00000307106 NLRP3Q96P20 1036 aa15.81■□□□□ 0.12
SMIM4-201ENST00000307106 GBA2Q9HCG7 927 aaPredicted RBP15.81■□□□□ 0.12
SMIM4-201ENST00000307106 DUOX1Q9NRD9 1551 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 ABCC4O15439 1325 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
SMIM4-201ENST00000307106 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
SMIM4-201ENST00000307106 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 C2orf69Q8N8R5 385 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
SMIM4-201ENST00000307106 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
SMIM4-201ENST00000307106 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
SMIM4-201ENST00000307106 MPNDQ8N594 471 aa15.79■□□□□ 0.12
SMIM4-201ENST00000307106 HPS5Q9UPZ3 1129 aa15.79■□□□□ 0.12
SMIM4-201ENST00000307106 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
SMIM4-201ENST00000307106 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
SMIM4-201ENST00000307106 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
SMIM4-201ENST00000307106 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
SMIM4-201ENST00000307106 KRT26Q7Z3Y9 468 aa15.78■□□□□ 0.12
SMIM4-201ENST00000307106 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
SMIM4-201ENST00000307106 SLC10A3P09131 477 aa15.77■□□□□ 0.12
SMIM4-201ENST00000307106 MYL6BP14649 208 aa15.77■□□□□ 0.12
SMIM4-201ENST00000307106 TAF7Q15545 349 aaPredicted RBP15.77■□□□□ 0.12
SMIM4-201ENST00000307106 SP8Q8IXZ3 490 aa15.77■□□□□ 0.12
SMIM4-201ENST00000307106 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
SMIM4-201ENST00000307106 MIS18AQ9NYP9 233 aa15.77■□□□□ 0.12
SMIM4-201ENST00000307106 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
SMIM4-201ENST00000307106 PSME4Q14997 1843 aa15.77■□□□□ 0.11
SMIM4-201ENST00000307106 ADM5C9JUS6 153 aa15.76■□□□□ 0.11
SMIM4-201ENST00000307106 BBOX1O75936 387 aa15.76■□□□□ 0.11
SMIM4-201ENST00000307106 TBC1D10BQ4KMP7 808 aaPredicted RBP15.76■□□□□ 0.11
SMIM4-201ENST00000307106 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
SMIM4-201ENST00000307106 GCC1Q96CN9 775 aa15.76■□□□□ 0.11
SMIM4-201ENST00000307106 HTATSF1O43719 755 aaKnown RBP15.75■□□□□ 0.11
SMIM4-201ENST00000307106 EGFRP00533 1210 aa15.75■□□□□ 0.11
SMIM4-201ENST00000307106 PARP10Q53GL7 1025 aa15.75■□□□□ 0.11
SMIM4-201ENST00000307106 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
SMIM4-201ENST00000307106 DPF2Q92785 391 aa15.75■□□□□ 0.11
SMIM4-201ENST00000307106 DCPSQ96C86 337 aaKnown RBP15.75■□□□□ 0.11
SMIM4-201ENST00000307106 PAPPA2Q9BXP8 1791 aa15.75■□□□□ 0.11
SMIM4-201ENST00000307106 PKN2Q16513 984 aaKnown RBP15.74■□□□□ 0.11
SMIM4-201ENST00000307106 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
SMIM4-201ENST00000307106 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
SMIM4-201ENST00000307106 RBBP6Q7Z6E9 1792 aaKnown RBP15.73■□□□□ 0.11
SMIM4-201ENST00000307106 PSMD14O00487 310 aa15.73■□□□□ 0.11
SMIM4-201ENST00000307106 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
SMIM4-201ENST00000307106 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
SMIM4-201ENST00000307106 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
SMIM4-201ENST00000307106 HDAC9Q9UKV0 1011 aa15.73■□□□□ 0.11
SMIM4-201ENST00000307106 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
SMIM4-201ENST00000307106 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMIM4-201ENST00000307106 NUDCQ9Y266 331 aa15.72■□□□□ 0.11
SMIM4-201ENST00000307106 GRAPQ13588 217 aa15.71■□□□□ 0.11
SMIM4-201ENST00000307106 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
SMIM4-201ENST00000307106 RASAL3Q86YV0 1011 aa15.71■□□□□ 0.11
SMIM4-201ENST00000307106 SULF1Q8IWU6 871 aa15.71■□□□□ 0.11
SMIM4-201ENST00000307106 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
SMIM4-201ENST00000307106 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
SMIM4-201ENST00000307106 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.11
SMIM4-201ENST00000307106 RPS12P25398 132 aaKnown RBP15.7■□□□□ 0.1
SMIM4-201ENST00000307106 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
SMIM4-201ENST00000307106 ZNF296Q8WUU4 475 aaPredicted RBP15.7■□□□□ 0.1
SMIM4-201ENST00000307106 CDCA5Q96FF9 252 aa15.7■□□□□ 0.1
SMIM4-201ENST00000307106 GGA3Q9NZ52 723 aa15.7■□□□□ 0.1
SMIM4-201ENST00000307106 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
SMIM4-201ENST00000307106 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
SMIM4-201ENST00000307106 WASHC4Q2M389 1173 aa15.69■□□□□ 0.1
SMIM4-201ENST00000307106 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
SMIM4-201ENST00000307106 HABP4Q5JVS0 413 aaKnown RBP15.69■□□□□ 0.1
SMIM4-201ENST00000307106 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
SMIM4-201ENST00000307106 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
SMIM4-201ENST00000307106 ASTN2O75129 1339 aaPredicted RBP15.68■□□□□ 0.1
SMIM4-201ENST00000307106 MKI67P46013 3256 aaKnown RBP15.67■□□□□ 0.1
SMIM4-201ENST00000307106 RTL9Q8NET4 1388 aa15.67■□□□□ 0.1
SMIM4-201ENST00000307106 TBC1D8O95759 1140 aa15.67■□□□□ 0.1
SMIM4-201ENST00000307106 FBXO46Q6PJ61 603 aaPredicted RBP15.67■□□□□ 0.1
SMIM4-201ENST00000307106 THUMPD2Q9BTF0 503 aaKnown RBP15.67■□□□□ 0.1
SMIM4-201ENST00000307106 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
SMIM4-201ENST00000307106 COL4A1P02462 1669 aa15.67■□□□□ 0.1
SMIM4-201ENST00000307106 ECE2O60344 883 aa15.66■□□□□ 0.1
SMIM4-201ENST00000307106 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
SMIM4-201ENST00000307106 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 FKBP1BP68106 108 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
SMIM4-201ENST00000307106 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 LRP10Q7Z4F1 713 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 NLRP10Q86W26 655 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
SMIM4-201ENST00000307106 LAMB1P07942 1786 aa15.64■□□□□ 0.1
SMIM4-201ENST00000307106 KIAA0100Q14667 2235 aaKnown RBP15.64■□□□□ 0.09
SMIM4-201ENST00000307106 GPR25O00155 361 aa15.64■□□□□ 0.09
SMIM4-201ENST00000307106 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
SMIM4-201ENST00000307106 ANGEL2Q5VTE6 544 aaKnown RBP15.64■□□□□ 0.09
SMIM4-201ENST00000307106 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
SMIM4-201ENST00000307106 POLLQ9UGP5 575 aa15.64■□□□□ 0.09
SMIM4-201ENST00000307106 TRMT112Q9UI30 125 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms