RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 RNF20Q5VTR2 975 aa19.39■□□□□ 0.69
OTUB1-201ENST00000301453 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
OTUB1-201ENST00000301453 TFIP11Q9UBB9 837 aaKnown RBP19.39■□□□□ 0.69
OTUB1-201ENST00000301453 ERBB3P21860 1342 aa19.38■□□□□ 0.69
OTUB1-201ENST00000301453 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
OTUB1-201ENST00000301453 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
OTUB1-201ENST00000301453 ZNF496Q96IT1 587 aaPredicted RBP19.38■□□□□ 0.69
OTUB1-201ENST00000301453 KCNF1Q9H3M0 494 aa19.38■□□□□ 0.69
OTUB1-201ENST00000301453 ELP1O95163 1332 aa19.38■□□□□ 0.69
OTUB1-201ENST00000301453 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
OTUB1-201ENST00000301453 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
OTUB1-201ENST00000301453 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
OTUB1-201ENST00000301453 NEXNQ0ZGT2 675 aa19.37■□□□□ 0.69
OTUB1-201ENST00000301453 TFCP2Q12800 502 aa19.37■□□□□ 0.69
OTUB1-201ENST00000301453 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
OTUB1-201ENST00000301453 COPRSQ9NQ92 184 aa19.37■□□□□ 0.69
OTUB1-201ENST00000301453 CCDC192P0DO97 292 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
OTUB1-201ENST00000301453 CCDC129Q6ZRS4 1044 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 SEC62Q99442 399 aaKnown RBP19.36■□□□□ 0.69
OTUB1-201ENST00000301453 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 MRVI1Q9Y6F6 885 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 LMTK3Q96Q04 1460 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 JAK2O60674 1132 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 ATP5JP18859 108 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 PDCP20941 246 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 TNNI3KQ59H18 835 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 MTERF4Q7Z6M4 381 aaKnown RBP19.36■□□□□ 0.69
OTUB1-201ENST00000301453 FPGT-TNNI3KV9GXZ4 949 aa19.36■□□□□ 0.69
OTUB1-201ENST00000301453 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
OTUB1-201ENST00000301453 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 MYRIPQ8NFW9 859 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 NUP62CLQ9H1M0 184 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 DACT1Q9NYF0 836 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 PYCARDQ9ULZ3 195 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 ZNF609O15014 1411 aa19.35■□□□□ 0.69
OTUB1-201ENST00000301453 PHKG2P15735 406 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 CKAP2LQ8IYA6 745 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 SPC24Q8NBT2 197 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 LEO1Q8WVC0 666 aaPredicted RBP19.34■□□□□ 0.69
OTUB1-201ENST00000301453 TSC1Q92574 1164 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 TYRO3Q06418 890 aa19.34■□□□□ 0.69
OTUB1-201ENST00000301453 SCN11AQ9UI33 1791 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 PDIA4P13667 645 aaKnown RBP19.33■□□□□ 0.69
OTUB1-201ENST00000301453 UBE3BQ7Z3V4 1068 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 LUZP1Q86V48 1076 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 PGBD1Q96JS3 809 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 SPATA32Q96LK8 384 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 DBNDD2Q9BQY9 259 aa19.33■□□□□ 0.69
OTUB1-201ENST00000301453 KIAA1524Q8TCG1 905 aa19.33■□□□□ 0.68
OTUB1-201ENST00000301453 FAM200AQ8TCP9 573 aa19.33■□□□□ 0.68
OTUB1-201ENST00000301453 CYP21A2P08686 494 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 RABL6Q3YEC7 729 aaPredicted RBP19.32■□□□□ 0.68
OTUB1-201ENST00000301453 RAPGEF4Q8WZA2 1011 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 GTF3C6Q969F1 213 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 NEK1Q96PY6 1258 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 SCAND2PQ9GZW5 306 aaPredicted RBP19.32■□□□□ 0.68
OTUB1-201ENST00000301453 NLRP2Q9NX02 1062 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 ATP5J2-PTCD1G3V325 749 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
OTUB1-201ENST00000301453 DDX11Q96FC9 970 aa19.32■□□□□ 0.68
OTUB1-201ENST00000301453 Q6ZUG5 572 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 DNAJC2Q99543 621 aaKnown RBP19.31■□□□□ 0.68
OTUB1-201ENST00000301453 MEGF6O75095 1541 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 RESTQ13127 1097 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 SLFNL1Q499Z3 407 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
OTUB1-201ENST00000301453 NR1I2O75469 434 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 RBM43Q6ZSC3 357 aaKnown RBP19.3■□□□□ 0.68
OTUB1-201ENST00000301453 STOX1Q6ZVD7 989 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 BRF1Q92994 677 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 CBX8Q9HC52 389 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 CASP7P55210 303 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
OTUB1-201ENST00000301453 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
OTUB1-201ENST00000301453 KRT32Q14532 448 aa19.29■□□□□ 0.68
OTUB1-201ENST00000301453 HAUS7Q99871 368 aa19.29■□□□□ 0.68
OTUB1-201ENST00000301453 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
OTUB1-201ENST00000301453 CLSTN2Q9H4D0 955 aa19.29■□□□□ 0.68
OTUB1-201ENST00000301453 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
OTUB1-201ENST00000301453 A0A087WZG4 1122 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 CYP27B1O15528 508 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 TATP17735 454 aaPredicted RBP19.28■□□□□ 0.68
OTUB1-201ENST00000301453 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
OTUB1-201ENST00000301453 SCRN1Q12765 414 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 ZNF710Q8N1W2 664 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 GOLGA6L4A6NEF3 574 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 GTF2F1P35269 517 aaKnown RBP eCLIP19.28■□□□□ 0.68
OTUB1-201ENST00000301453 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
OTUB1-201ENST00000301453 U3KPZ7 1027 aaPredicted RBP19.28■□□□□ 0.68
OTUB1-201ENST00000301453 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
OTUB1-201ENST00000301453 FAM177BA6PVY3 158 aa19.27■□□□□ 0.68
OTUB1-201ENST00000301453 PTGS1P23219 599 aa19.27■□□□□ 0.68
OTUB1-201ENST00000301453 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms