RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
TRIM44-201ENST00000299413 ZSCAN31Q96LW9 406 aaPredicted RBP11.39□□□□□ -0.59
TRIM44-201ENST00000299413 SFPQP23246 707 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM44-201ENST00000299413 PPP2R5DQ14738 602 aa11.39□□□□□ -0.59
TRIM44-201ENST00000299413 TMCO4Q5TGY1 634 aa11.39□□□□□ -0.59
TRIM44-201ENST00000299413 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
TRIM44-201ENST00000299413 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 FBLN1P23142 703 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 ZNF804AQ7Z570 1209 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
TRIM44-201ENST00000299413 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
TRIM44-201ENST00000299413 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
TRIM44-201ENST00000299413 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC175P0C221 793 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 NAPAP54920 295 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
TRIM44-201ENST00000299413 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 FAM13AO94988 1023 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 GSTO1P78417 241 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 GDPD2Q9HCC8 539 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 ERMNQ8TAM6 284 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 PTGS1P23219 599 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 DNAAF4Q8WXU2 420 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 METAP2P50579 478 aaKnown RBP eCLIP11.38□□□□□ -0.591e-9■■□□□ 14.5
TRIM44-201ENST00000299413 CCDC65Q8IXS2 484 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 KRT13P13646 458 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 PICK1Q9NRD5 415 aa11.38□□□□□ -0.59
TRIM44-201ENST00000299413 GNPATO15228 680 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 CRCPO75575 148 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
TRIM44-201ENST00000299413 RNF34Q969K3 372 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 UBA7P41226 1012 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 YEATS4O95619 227 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
TRIM44-201ENST00000299413 NESP48681 1621 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 CC2D2AQ9P2K1 1620 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 RAB11FIP3O75154 756 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 STX6O43752 255 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 URI1O94763 535 aaPredicted RBP11.37□□□□□ -0.59
TRIM44-201ENST00000299413 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 MSH6P52701 1360 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 LPXNO60711 386 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 LRRC45Q96CN5 670 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
TRIM44-201ENST00000299413 EIF6P56537 245 aaKnown RBP11.37□□□□□ -0.59
TRIM44-201ENST00000299413 KRT5P13647 590 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
TRIM44-201ENST00000299413 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
TRIM44-201ENST00000299413 USO1O60763 962 aaKnown RBP11.36□□□□□ -0.59
TRIM44-201ENST00000299413 STAT6P42226 847 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 TAOK3Q9H2K8 898 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 UBXN4Q92575 508 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 TRIM6Q9C030 488 aaPredicted RBP11.36□□□□□ -0.59
TRIM44-201ENST00000299413 JADE2Q9NQC1 790 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
TRIM44-201ENST00000299413 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
TRIM44-201ENST00000299413 KRT9P35527 623 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
TRIM44-201ENST00000299413 CNGA1P29973 690 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 ASIC1P78348 528 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 PPARDQ03181 441 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 MAEAQ7L5Y9 396 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 MAGEB6Q8N7X4 407 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 WTAPQ15007 396 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 CTR9Q6PD62 1173 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 MAK16Q9BXY0 300 aaKnown RBP11.35□□□□□ -0.59
TRIM44-201ENST00000299413 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 SNX16P57768 344 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 DDB1Q16531 1140 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 RNF169Q8NCN4 708 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 LDHCP07864 332 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 PLCB3Q01970 1234 aa11.35□□□□□ -0.59
TRIM44-201ENST00000299413 GEN1Q17RS7 908 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 DDX39AO00148 427 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 RTCBQ9Y3I0 505 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 ABL1P00519 1130 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 TPD52P55327 224 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms