RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 LZTFL1Q9NQ48 299 aa16.94■□□□□ 0.3
SCN3B-201ENST00000299333 SAMD15Q9P1V8 674 aa16.94■□□□□ 0.3
SCN3B-201ENST00000299333 AFMP43652 599 aa16.94■□□□□ 0.3
SCN3B-201ENST00000299333 ALDH1L2Q3SY69 923 aa16.94■□□□□ 0.3
SCN3B-201ENST00000299333 HS1BP3Q53T59 392 aa16.94■□□□□ 0.3
SCN3B-201ENST00000299333 F6X3S4 739 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 MYCBPQ99417 103 aaPredicted RBP16.93■□□□□ 0.3
SCN3B-201ENST00000299333 ZSCAN16Q9H4T2 348 aaPredicted RBP16.93■□□□□ 0.3
SCN3B-201ENST00000299333 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
SCN3B-201ENST00000299333 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
SCN3B-201ENST00000299333 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 CFTRP13569 1480 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 TERF1P54274 439 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
SCN3B-201ENST00000299333 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 TSHZ3Q63HK5 1081 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 SEPT14Q6ZU15 432 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 AKAP2Q9Y2D5 859 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 UBA7P41226 1012 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 HDXQ7Z353 690 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
SCN3B-201ENST00000299333 MCM10Q7L590 875 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 TLDC2A0PJX2 215 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 IGHMBP2P38935 993 aaKnown RBP16.92■□□□□ 0.3
SCN3B-201ENST00000299333 PSMC4P43686 418 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 TTC16Q8NEE8 873 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 SREK1Q8WXA9 508 aaKnown RBP16.92■□□□□ 0.3
SCN3B-201ENST00000299333 A0A087WZG4 1122 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 PDE1CQ14123 709 aaPredicted RBP16.92■□□□□ 0.3
SCN3B-201ENST00000299333 PPP4R3AQ6IN85 833 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
SCN3B-201ENST00000299333 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 LMOD1P29536 600 aaPredicted RBP16.91■□□□□ 0.3
SCN3B-201ENST00000299333 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 SPAG5Q96R06 1193 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 CEP120Q8N960 986 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 CCDC63Q8NA47 563 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 TRIM27P14373 513 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 CFAP58Q5T655 872 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 MICU3Q86XE3 530 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 EXOC1Q9NV70 894 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 MAP2K2P36507 400 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 SETDB1Q15047 1291 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 KCNK9Q9NPC2 374 aa16.91■□□□□ 0.3
SCN3B-201ENST00000299333 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
SCN3B-201ENST00000299333 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
SCN3B-201ENST00000299333 TYRO3Q06418 890 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 TTC22Q5TAA0 569 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 CATIPQ7Z7H3 387 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 PLVAPQ9BX97 442 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 PCK1P35558 622 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 TRMT1LQ7Z2T5 733 aaKnown RBP16.9■□□□□ 0.3
SCN3B-201ENST00000299333 PYM1Q9BRP8 204 aaKnown RBP16.9■□□□□ 0.3
SCN3B-201ENST00000299333 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
SCN3B-201ENST00000299333 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
SCN3B-201ENST00000299333 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
SCN3B-201ENST00000299333 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
SCN3B-201ENST00000299333 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.3
SCN3B-201ENST00000299333 NCAPD3P42695 1498 aa16.89■□□□□ 0.3
SCN3B-201ENST00000299333 KRT86O43790 486 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCN3B-201ENST00000299333 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
SCN3B-201ENST00000299333 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 TPD52P55327 224 aaPredicted RBP16.89■□□□□ 0.29
SCN3B-201ENST00000299333 HAND2P61296 217 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 KIF5AQ12840 1032 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.29
SCN3B-201ENST00000299333 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 EVCP57679 992 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 SYCP3Q8IZU3 236 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 VAV2P52735 878 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
SCN3B-201ENST00000299333 KRT83P78385 493 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
SCN3B-201ENST00000299333 STMN2Q93045 179 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 INPP5BP32019 993 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
SCN3B-201ENST00000299333 TBC1D5Q92609 795 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 GNAT3A8MTJ3 354 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 ATP11AP98196 1134 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
SCN3B-201ENST00000299333 MYD88Q99836 296 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms