RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SLC51AQ86UW1 340 aa27.12■■□□□ 1.93
SMCO4-201ENST00000298966 SUPT20HQ8NEM7 779 aa27.12■■□□□ 1.93
SMCO4-201ENST00000298966 CFAP44Q96MT7 982 aa27.12■■□□□ 1.93
SMCO4-201ENST00000298966 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
SMCO4-201ENST00000298966 CASP8AP2Q9UKL3 1982 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 NTSR2O95665 410 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 CXCL9Q07325 125 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 NFE2L2Q16236 605 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 WWC1Q8IX03 1113 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 ZNF34Q8IZ26 560 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 HHIPL1Q96JK4 782 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 NLRP3Q96P20 1036 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 ZNRF3Q9ULT6 936 aa27.11■■□□□ 1.93
SMCO4-201ENST00000298966 ATP6V0A2Q9Y487 856 aa27.1■■□□□ 1.93
SMCO4-201ENST00000298966 GMPSP49915 693 aaPredicted RBP27.09■■□□□ 1.93
SMCO4-201ENST00000298966 EIF4A1P60842 406 aaKnown RBP27.09■■□□□ 1.93
SMCO4-201ENST00000298966 GIGYF2Q6Y7W6 1299 aaKnown RBP27.09■■□□□ 1.93
SMCO4-201ENST00000298966 C3orf67Q6ZVT6 689 aa27.09■■□□□ 1.93
SMCO4-201ENST00000298966 GLIS2Q9BZE0 524 aaPredicted RBP27.09■■□□□ 1.93
SMCO4-201ENST00000298966 MCOLN1Q9GZU1 580 aa27.09■■□□□ 1.93
SMCO4-201ENST00000298966 E9PSI1 815 aa27.08■■□□□ 1.93
SMCO4-201ENST00000298966 BRPF1P55201 1214 aaPredicted RBP27.08■■□□□ 1.93
SMCO4-201ENST00000298966 PARP10Q53GL7 1025 aa27.08■■□□□ 1.93
SMCO4-201ENST00000298966 GTF3C3Q9Y5Q9 886 aa27.08■■□□□ 1.93
SMCO4-201ENST00000298966 CALD1Q05682 793 aaKnown RBP27.07■■□□□ 1.92
SMCO4-201ENST00000298966 BCL2L13Q9BXK5 485 aa27.07■■□□□ 1.92
SMCO4-201ENST00000298966 ZNF408Q9H9D4 720 aa27.07■■□□□ 1.92
SMCO4-201ENST00000298966 IL16Q14005 1332 aa27.07■■□□□ 1.92
SMCO4-201ENST00000298966 CDHR2Q9BYE9 1310 aa27.07■■□□□ 1.92
SMCO4-201ENST00000298966 RIPK4P57078 832 aa27.06■■□□□ 1.92
SMCO4-201ENST00000298966 CIAPIN1Q6FI81 312 aa27.06■■□□□ 1.92
SMCO4-201ENST00000298966 PGAP2Q9UHJ9 254 aa27.06■■□□□ 1.92
SMCO4-201ENST00000298966 DPP8Q6V1X1 898 aaPredicted RBP27.05■■□□□ 1.92
SMCO4-201ENST00000298966 ZC3H15Q8WU90 426 aaKnown RBP27.05■■□□□ 1.92
SMCO4-201ENST00000298966 RTFDC1Q9BY42 306 aaPredicted RBP27.05■■□□□ 1.92
SMCO4-201ENST00000298966 ERBB4Q15303 1308 aa27.05■■□□□ 1.92
SMCO4-201ENST00000298966 SLFN5Q08AF3 891 aa27.04■■□□□ 1.92
SMCO4-201ENST00000298966 TNIP1Q15025 636 aa27.04■■□□□ 1.92
SMCO4-201ENST00000298966 CDC37L1Q7L3B6 337 aa27.04■■□□□ 1.92
SMCO4-201ENST00000298966 UTP14AQ9BVJ6 771 aaKnown RBP27.04■■□□□ 1.92
SMCO4-201ENST00000298966 ABCC4O15439 1325 aa27.04■■□□□ 1.92
SMCO4-201ENST00000298966 DGKZQ13574 1117 aa27.03■■□□□ 1.92
SMCO4-201ENST00000298966 NEUROD2Q15784 382 aa27.03■■□□□ 1.92
SMCO4-201ENST00000298966 SLC10A5Q5PT55 438 aa27.03■■□□□ 1.92
SMCO4-201ENST00000298966 MPNDQ8N594 471 aa27.03■■□□□ 1.92
SMCO4-201ENST00000298966 BBOX1O75936 387 aa27.02■■□□□ 1.92
SMCO4-201ENST00000298966 TRMT2AQ8IZ69 625 aaKnown RBP27.02■■□□□ 1.92
SMCO4-201ENST00000298966 RAD17O75943 681 aa27.01■■□□□ 1.91
SMCO4-201ENST00000298966 KIAA2012Q0VF49 1180 aa27.01■■□□□ 1.91
SMCO4-201ENST00000298966 NOGQ13253 232 aa27.01■■□□□ 1.91
SMCO4-201ENST00000298966 SP8Q8IXZ3 490 aa27.01■■□□□ 1.91
SMCO4-201ENST00000298966 TRIM35Q9UPQ4 493 aa27.01■■□□□ 1.91
SMCO4-201ENST00000298966 HIRAP54198 1017 aaPredicted RBP27■■□□□ 1.91
SMCO4-201ENST00000298966 PCDH10Q9P2E7 1040 aa27■■□□□ 1.91
SMCO4-201ENST00000298966 TRPM4Q8TD43 1214 aa26.99■■□□□ 1.91
SMCO4-201ENST00000298966 MYH16Q9H6N6 1097 aa26.99■■□□□ 1.91
SMCO4-201ENST00000298966 LAMB2P55268 1798 aa26.99■■□□□ 1.91
SMCO4-201ENST00000298966 PDE4DIPQ5VU43 2346 aa26.99■■□□□ 1.91
SMCO4-201ENST00000298966 H7C1D1 291 aa26.98■■□□□ 1.91
SMCO4-201ENST00000298966 CDCA7LQ96GN5 454 aa26.98■■□□□ 1.91
SMCO4-201ENST00000298966 THUMPD2Q9BTF0 503 aaKnown RBP26.98■■□□□ 1.91
SMCO4-201ENST00000298966 CNOT7Q9UIV1 285 aaKnown RBP26.98■■□□□ 1.91
SMCO4-201ENST00000298966 ANKRD36CQ5JPF3 1778 aa26.98■■□□□ 1.91
SMCO4-201ENST00000298966 HUNKP57058 714 aa26.97■■□□□ 1.91
SMCO4-201ENST00000298966 DUSP27Q5VZP5 1158 aa26.97■■□□□ 1.91
SMCO4-201ENST00000298966 DDX46Q7L014 1031 aaKnown RBP26.96■■□□□ 1.91
SMCO4-201ENST00000298966 HSP90AB3PQ58FF7 597 aa26.95■■□□□ 1.9
SMCO4-201ENST00000298966 USP48Q86UV5 1035 aa26.95■■□□□ 1.9
SMCO4-201ENST00000298966 EIF2S2P20042 333 aaKnown RBP26.94■■□□□ 1.9
SMCO4-201ENST00000298966 MICALL2Q8IY33 904 aa26.94■■□□□ 1.9
SMCO4-201ENST00000298966 HCLS1P14317 486 aaPredicted RBP26.93■■□□□ 1.9
SMCO4-201ENST00000298966 GRAPQ13588 217 aa26.93■■□□□ 1.9
SMCO4-201ENST00000298966 LRP10Q7Z4F1 713 aa26.93■■□□□ 1.9
SMCO4-201ENST00000298966 GRAPLQ8TC17 118 aaPredicted RBP26.93■■□□□ 1.9
SMCO4-201ENST00000298966 ZIC5Q96T25 663 aa26.93■■□□□ 1.9
SMCO4-201ENST00000298966 TSPYL4Q9UJ04 414 aa26.93■■□□□ 1.9
SMCO4-201ENST00000298966 SHTN1A0MZ66 631 aa26.92■■□□□ 1.9
SMCO4-201ENST00000298966 YDJCA8MPS7 323 aa26.92■■□□□ 1.9
SMCO4-201ENST00000298966 PDIA6Q15084 440 aa26.92■■□□□ 1.9
SMCO4-201ENST00000298966 NEFLP07196 543 aa26.91■■□□□ 1.9
SMCO4-201ENST00000298966 RGMBQ6NW40 437 aa26.91■■□□□ 1.9
SMCO4-201ENST00000298966 TMC4Q7Z404 712 aa26.91■■□□□ 1.9
SMCO4-201ENST00000298966 NLRP10Q86W26 655 aa26.91■■□□□ 1.9
SMCO4-201ENST00000298966 POLR2AP24928 1970 aaKnown RBP26.9■■□□□ 1.9
SMCO4-201ENST00000298966 TAF1P21675 1872 aa26.9■■□□□ 1.9
SMCO4-201ENST00000298966 ANXA1P04083 346 aa26.9■■□□□ 1.9
SMCO4-201ENST00000298966 CT47B1P0C2W7 299 aaPredicted RBP26.9■■□□□ 1.9
SMCO4-201ENST00000298966 DPF2Q92785 391 aa26.9■■□□□ 1.9
SMCO4-201ENST00000298966 TRMT112Q9UI30 125 aaKnown RBP26.9■■□□□ 1.9
SMCO4-201ENST00000298966 SUPT16HQ9Y5B9 1047 aaKnown RBP26.9■■□□□ 1.9
SMCO4-201ENST00000298966 SH3TC1Q8TE82 1336 aa26.9■■□□□ 1.9
SMCO4-201ENST00000298966 GNAI1P63096 354 aa26.89■■□□□ 1.9
SMCO4-201ENST00000298966 PROSER3Q2NL68 480 aa26.89■■□□□ 1.9
SMCO4-201ENST00000298966 KRT26Q7Z3Y9 468 aa26.89■■□□□ 1.9
SMCO4-201ENST00000298966 C2orf69Q8N8R5 385 aa26.89■■□□□ 1.9
SMCO4-201ENST00000298966 IFT57Q9NWB7 429 aa26.89■■□□□ 1.9
SMCO4-201ENST00000298966 ZBTB12Q9Y330 459 aaPredicted RBP26.89■■□□□ 1.9
SMCO4-201ENST00000298966 SAMD7Q7Z3H4 446 aa26.88■■□□□ 1.89
SMCO4-201ENST00000298966 CCDC102AQ96A19 550 aa26.88■■□□□ 1.89
SMCO4-201ENST00000298966 GBA2Q9HCG7 927 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms