RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 TRAF1Q13077 416 aa3.72□□□□□ -1.81
HDX-201ENST00000297977 TRIM28Q13263 835 aaKnown RBP3.72□□□□□ -1.81
HDX-201ENST00000297977 POTEAQ6S8J7 498 aa3.72□□□□□ -1.81
HDX-201ENST00000297977 RGS22Q8NE09 1264 aa3.72□□□□□ -1.81
HDX-201ENST00000297977 F6X3S4 739 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 KCNQ2O43526 872 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 MSL1Q68DK7 614 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 AACSQ86V21 672 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 CREBRFQ8IUR6 639 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 CRACR2BQ8N4Y2 399 aaPredicted RBP3.71□□□□□ -1.81
HDX-201ENST00000297977 PANK1Q8TE04 598 aa3.71□□□□□ -1.81
HDX-201ENST00000297977 PSDA5PKW4 1024 aaPredicted RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 PPIP5K2O43314 1243 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 ZFYP08048 801 aaPredicted RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 ANAPC15P60006 121 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 ZBTB38Q8NAP3 1195 aaPredicted RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 WDR66Q8TBY9 1149 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 FAM89AQ96GI7 184 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 IQCA1LA6NCM1 817 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 ONECUT3O60422 494 aaPredicted RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 TUBB4AP04350 444 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 GCKRQ14397 625 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 NOL8Q76FK4 1167 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 TAOK3Q9H2K8 898 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 CARMIL3Q8ND23 1372 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 IDH1O75874 414 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 UFL1O94874 794 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 CALRP27797 417 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 FKBP4Q02790 459 aaKnown RBP eCLIP3.71□□□□□ -1.82
HDX-201ENST00000297977 GNL2Q13823 731 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 ARHGEF6Q15052 776 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 CCDC97Q96F63 343 aaPredicted RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 CABP5Q9NP86 173 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 LEMD3Q9Y2U8 911 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 EYA2O00167 538 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 EIF5P55010 431 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 CNPY4Q8N129 248 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 AIDAQ96BJ3 306 aa3.71□□□□□ -1.82
HDX-201ENST00000297977 LRRFIP2Q9Y608 721 aaKnown RBP3.71□□□□□ -1.82
HDX-201ENST00000297977 DHX16O60231 1041 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 CYP19A1P11511 503 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 CAVIN1Q6NZI2 390 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 TMEM57Q8N5G2 664 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 ARHGEF1Q92888 912 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 DNAJC2Q99543 621 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 DENND2AQ9ULE3 1009 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 ZNF142P52746 1687 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 TNS2Q63HR2 1409 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 BCAR3O75815 825 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 HCLS1P14317 486 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 ZRSR1Q15695 479 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 EZH2Q15910 746 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 INTS3Q68E01 1043 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 CRBNQ96SW2 442 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 ECHDC1Q9NTX5 307 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 TCEAL9Q9UHQ7 104 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 TRIM35Q9UPQ4 493 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 ATP6V1DQ9Y5K8 247 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 COL5A2P05997 1499 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 COL15A1P39059 1388 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 USP32Q8NFA0 1604 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 MROH5Q6ZUA9 1318 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 KDM2BQ8NHM5 1336 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 TPM3P06753 285 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 USP5P45974 858 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 CCDC184Q52MB2 194 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 RNF41Q9H4P4 317 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 CD2APQ9Y5K6 639 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 TRIM27P14373 513 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 HIBADHP31937 336 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 IKQ13123 557 aaPredicted RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 UBE4AQ14139 1066 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 MRPL50Q8N5N7 158 aaKnown RBP3.7□□□□□ -1.82
HDX-201ENST00000297977 PPLO60437 1756 aa3.7□□□□□ -1.82
HDX-201ENST00000297977 SOCS7O14512 581 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 CPLX1O14810 134 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 TGFB2P61812 414 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 CSPP1Q1MSJ5 1256 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 LNPKQ9C0E8 428 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 IQSEC3Q9UPP2 1182 aaPredicted RBP3.69□□□□□ -1.82
HDX-201ENST00000297977 GJA3Q9Y6H8 435 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 XDHP47989 1333 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 CLGNO14967 610 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 POLR3DP05423 398 aaPredicted RBP3.69□□□□□ -1.82
HDX-201ENST00000297977 TDO2P48775 406 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 FAM193AP78312 1265 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 ATP8B2P98198 1209 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 PUM3Q15397 648 aaKnown RBP3.69□□□□□ -1.82
HDX-201ENST00000297977 CCDC178Q5BJE1 867 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 TTC6Q86TZ1 520 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 ANKRD13AQ8IZ07 590 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 CRNKL1Q9BZJ0 848 aaKnown RBP3.69□□□□□ -1.82
HDX-201ENST00000297977 PRM3Q9NNZ6 103 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 ST18O60284 1047 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 MARCH6O60337 910 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 ITGA6P23229 1130 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 PSMA5P28066 241 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 PIP4K2AP48426 406 aaPredicted RBP3.69□□□□□ -1.82
HDX-201ENST00000297977 DLGAP5Q15398 846 aa3.69□□□□□ -1.82
HDX-201ENST00000297977 SMYD5Q6GMV2 418 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms