RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 NDUFB9Q9Y6M9 179 aa23.94■■□□□ 1.42
CXCL16-201ENST00000293778 TAF5LO75529 589 aa23.93■■□□□ 1.42
CXCL16-201ENST00000293778 CCDC83Q8IWF9 413 aa23.93■■□□□ 1.42
CXCL16-201ENST00000293778 NSFL1CQ9UNZ2 370 aaKnown RBP23.93■■□□□ 1.42
CXCL16-201ENST00000293778 ZSCAN22P10073 491 aaPredicted RBP23.92■■□□□ 1.42
CXCL16-201ENST00000293778 IL15P40933 162 aaPredicted RBP23.92■■□□□ 1.42
CXCL16-201ENST00000293778 GPR108Q9NPR9 543 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 BTG4Q9NY30 223 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 STX6O43752 255 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 SYT1P21579 422 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 FOXD4L6Q3SYB3 417 aaPredicted RBP23.92■■□□□ 1.42
CXCL16-201ENST00000293778 FOXD4L3Q6VB84 417 aaPredicted RBP23.92■■□□□ 1.42
CXCL16-201ENST00000293778 ISCA1Q9BUE6 129 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 HMG20BQ9P0W2 317 aa23.92■■□□□ 1.42
CXCL16-201ENST00000293778 NASPP49321 788 aaPredicted RBP23.91■■□□□ 1.42
CXCL16-201ENST00000293778 NEUROD6Q96NK8 337 aa23.91■■□□□ 1.42
CXCL16-201ENST00000293778 TEX13AQ9BXU3 409 aaPredicted RBP23.91■■□□□ 1.42
CXCL16-201ENST00000293778 TMEM63CQ9P1W3 806 aa23.91■■□□□ 1.42
CXCL16-201ENST00000293778 ZNF330Q9Y3S2 320 aaPredicted RBP23.91■■□□□ 1.42
CXCL16-201ENST00000293778 PIGBQ92521 554 aa23.91■■□□□ 1.42
CXCL16-201ENST00000293778 ASAP1Q9ULH1 1129 aa23.91■■□□□ 1.42
CXCL16-201ENST00000293778 EYA2O00167 538 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 TCIRG1Q13488 830 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 ME3Q16798 604 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 BLOC1S2Q6QNY1 142 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
CXCL16-201ENST00000293778 ZNF609O15014 1411 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 USPL1Q5W0Q7 1092 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
CXCL16-201ENST00000293778 DNAJC10Q8IXB1 793 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 ATG3Q9NT62 314 aa23.9■■□□□ 1.42
CXCL16-201ENST00000293778 GJB2P29033 226 aa23.89■■□□□ 1.41
CXCL16-201ENST00000293778 TSGA10IPQ3SY00 556 aa23.89■■□□□ 1.41
CXCL16-201ENST00000293778 ZNF594Q96JF6 807 aaPredicted RBP23.89■■□□□ 1.41
CXCL16-201ENST00000293778 RPS6KB1P23443 525 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 LRRC24Q50LG9 513 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 KBTBD3Q8NAB2 608 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 TPCN1Q9ULQ1 816 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 TAF6LQ9Y6J9 622 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 CIAO1O76071 339 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 ANKRD1Q15327 319 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 GDPD2Q9HCC8 539 aa23.88■■□□□ 1.41
CXCL16-201ENST00000293778 TIMM10P62072 90 aa23.87■■□□□ 1.41
CXCL16-201ENST00000293778 ST3GAL1Q11201 340 aa23.87■■□□□ 1.41
CXCL16-201ENST00000293778 COL9A3Q14050 684 aaPredicted RBP23.87■■□□□ 1.41
CXCL16-201ENST00000293778 MCMDC2Q4G0Z9 681 aa23.87■■□□□ 1.41
CXCL16-201ENST00000293778 RRAGDQ9NQL2 400 aaPredicted RBP23.87■■□□□ 1.41
CXCL16-201ENST00000293778 USP48Q86UV5 1035 aa23.87■■□□□ 1.41
CXCL16-201ENST00000293778 ALDH8A1Q9H2A2 487 aaPredicted RBP23.87■■□□□ 1.41
CXCL16-201ENST00000293778 STARD3NLO95772 234 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 F13A1P00488 732 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 CHGBP05060 677 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
CXCL16-201ENST00000293778 TRIM28Q13263 835 aaKnown RBP23.86■■□□□ 1.41
CXCL16-201ENST00000293778 NECAB1Q8N987 351 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 SEC62Q99442 399 aaKnown RBP23.86■■□□□ 1.41
CXCL16-201ENST00000293778 KRT32Q14532 448 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 CCDC129Q6ZRS4 1044 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 ANP32BQ92688 251 aaKnown RBP23.86■■□□□ 1.41
CXCL16-201ENST00000293778 PAG1Q9NWQ8 432 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 ATP6V1DQ9Y5K8 247 aa23.86■■□□□ 1.41
CXCL16-201ENST00000293778 U3KPZ7 1027 aaPredicted RBP23.86■■□□□ 1.41
CXCL16-201ENST00000293778 PALLDQ8WX93 1383 aa23.85■■□□□ 1.41
CXCL16-201ENST00000293778 LRSAM1Q6UWE0 723 aa23.85■■□□□ 1.41
CXCL16-201ENST00000293778 TMEM87AQ8NBN3 555 aa23.85■■□□□ 1.41
CXCL16-201ENST00000293778 SYCE3A1L190 88 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 GOLIM4O00461 696 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 CCDC57Q2TAC2 916 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 TCEANC2Q96MN5 208 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 PUS3Q9BZE2 481 aaKnown RBP23.84■■□□□ 1.41
CXCL16-201ENST00000293778 ANO8Q9HCE9 1232 aaPredicted RBP23.84■■□□□ 1.41
CXCL16-201ENST00000293778 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 GADD45BO75293 160 aaPredicted RBP23.84■■□□□ 1.41
CXCL16-201ENST00000293778 CCDC173Q0VFZ6 552 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 SYAP1Q96A49 352 aaPredicted RBP23.84■■□□□ 1.41
CXCL16-201ENST00000293778 RBSNQ9H1K0 784 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 CNPY2Q9Y2B0 182 aa23.84■■□□□ 1.41
CXCL16-201ENST00000293778 COL14A1Q05707 1796 aaKnown RBP23.83■■□□□ 1.41
CXCL16-201ENST00000293778 A0A1B0GUL7 405 aa23.83■■□□□ 1.41
CXCL16-201ENST00000293778 PCCAP05165 728 aaPredicted RBP23.83■■□□□ 1.41
CXCL16-201ENST00000293778 MTMR6Q9Y217 621 aa23.83■■□□□ 1.41
CXCL16-201ENST00000293778 ITGB4P16144 1822 aa23.83■■□□□ 1.41
CXCL16-201ENST00000293778 TRIM44Q96DX7 344 aaPredicted RBP23.83■■□□□ 1.4
CXCL16-201ENST00000293778 TOB2Q14106 344 aaPredicted RBP23.82■■□□□ 1.4
CXCL16-201ENST00000293778 TICAM2Q86XR7 235 aa23.82■■□□□ 1.4
CXCL16-201ENST00000293778 CEP126Q9P2H0 1117 aa23.82■■□□□ 1.4
CXCL16-201ENST00000293778 DTNBO60941 627 aa23.82■■□□□ 1.4
CXCL16-201ENST00000293778 PPP1R9BQ96SB3 815 aa23.82■■□□□ 1.4
CXCL16-201ENST00000293778 MAP3K15Q6ZN16 1313 aa23.81■■□□□ 1.4
CXCL16-201ENST00000293778 IFIT1P09914 478 aaKnown RBP23.81■■□□□ 1.4
CXCL16-201ENST00000293778 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
CXCL16-201ENST00000293778 HELLSQ9NRZ9 838 aa23.81■■□□□ 1.4
CXCL16-201ENST00000293778 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
CXCL16-201ENST00000293778 NEK1Q96PY6 1258 aa23.8■■□□□ 1.4
CXCL16-201ENST00000293778 PLA2G12BQ9BX93 195 aa23.8■■□□□ 1.4
CXCL16-201ENST00000293778 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
CXCL16-201ENST00000293778 BCL9O00512 1426 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms