RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 KRT23Q9C075 422 aa22.3■■□□□ 1.16
LSM11-201ENST00000286307 NUP62CLQ9H1M0 184 aa22.3■■□□□ 1.16
LSM11-201ENST00000286307 TRPC5Q9UL62 973 aaPredicted RBP22.3■■□□□ 1.16
LSM11-201ENST00000286307 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
LSM11-201ENST00000286307 IL16Q14005 1332 aa22.3■■□□□ 1.16
LSM11-201ENST00000286307 CAMK4Q16566 473 aa22.3■■□□□ 1.16
LSM11-201ENST00000286307 CBFA2T2O43439 604 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 ESR2Q92731 530 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 TXLNBQ8N3L3 684 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 TCP11L1Q9NUJ3 509 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 RAB3GAP1Q15042 981 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 NUP160Q12769 1436 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
LSM11-201ENST00000286307 CCDC178Q5BJE1 867 aa22.28■■□□□ 1.16
LSM11-201ENST00000286307 B4DLN1 442 aa22.28■■□□□ 1.16
LSM11-201ENST00000286307 MRPL12P52815 198 aaKnown RBP22.28■■□□□ 1.16
LSM11-201ENST00000286307 NIM1KQ8IY84 436 aa22.28■■□□□ 1.16
LSM11-201ENST00000286307 ENOX2Q16206 610 aaKnown RBP22.28■■□□□ 1.16
LSM11-201ENST00000286307 FAM177A1Q8N128 213 aaPredicted RBP22.28■■□□□ 1.16
LSM11-201ENST00000286307 NEK1Q96PY6 1258 aa22.28■■□□□ 1.16
LSM11-201ENST00000286307 TMOD4Q9NZQ9 345 aa22.28■■□□□ 1.16
LSM11-201ENST00000286307 ZFYP08048 801 aaPredicted RBP22.27■■□□□ 1.16
LSM11-201ENST00000286307 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
LSM11-201ENST00000286307 ERLIN2O94905 339 aa22.27■■□□□ 1.16
LSM11-201ENST00000286307 IDEP14735 1019 aa22.27■■□□□ 1.16
LSM11-201ENST00000286307 ACBD3Q9H3P7 528 aa22.27■■□□□ 1.16
LSM11-201ENST00000286307 PRAG1Q86YV5 1406 aa22.27■■□□□ 1.15
LSM11-201ENST00000286307 ARGLU1Q9NWB6 273 aaPredicted RBP22.26■■□□□ 1.15
LSM11-201ENST00000286307 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 ANKRD62A6NC57 917 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 TRAF1Q13077 416 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 KRT24Q2M2I5 525 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 ZNF397Q8NF99 534 aaPredicted RBP22.26■■□□□ 1.15
LSM11-201ENST00000286307 TRIM37O94972 964 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 MCM5P33992 734 aa22.26■■□□□ 1.15
LSM11-201ENST00000286307 SH2B1Q9NRF2 756 aaPredicted RBP22.26■■□□□ 1.15
LSM11-201ENST00000286307 CCP110O43303 1012 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 A1BGP04217 495 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 CALM1P0DP23 149 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 CALM2P0DP24 149 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 CALM3P0DP25 149 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 HMGN5P82970 282 aaKnown RBP22.25■■□□□ 1.15
LSM11-201ENST00000286307 LTKP29376 864 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 LINS1Q8NG48 757 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 PAG1Q9NWQ8 432 aa22.25■■□□□ 1.15
LSM11-201ENST00000286307 SUPT20HQ8NEM7 779 aa22.24■■□□□ 1.15
LSM11-201ENST00000286307 PTPRKQ15262 1439 aa22.24■■□□□ 1.15
LSM11-201ENST00000286307 TFCP2Q12800 502 aa22.24■■□□□ 1.15
LSM11-201ENST00000286307 PUF60Q9UHX1 559 aaKnown RBP22.24■■□□□ 1.15
LSM11-201ENST00000286307 SP4Q02446 784 aa22.24■■□□□ 1.15
LSM11-201ENST00000286307 FKBP15Q5T1M5 1219 aa22.24■■□□□ 1.15
LSM11-201ENST00000286307 EIF2AK4Q9P2K8 1649 aaKnown RBP22.24■■□□□ 1.15
LSM11-201ENST00000286307 SEPT7Q16181 437 aaKnown RBP22.24■■□□□ 1.15
LSM11-201ENST00000286307 KIAA1328Q86T90 577 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 ITGA6P23229 1130 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 CACNA2D4Q7Z3S7 1137 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 ORC3Q9UBD5 711 aaPredicted RBP22.23■■□□□ 1.15
LSM11-201ENST00000286307 SMTNL1A8MU46 457 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 TCERG1LQ5VWI1 586 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 MPNDQ8N594 471 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 WDR70Q9NW82 654 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 NAPAP54920 295 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 DPY19L2Q6NUT2 758 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 BICC1Q9H694 974 aaKnown RBP22.23■■□□□ 1.15
LSM11-201ENST00000286307 CNNM2Q9H8M5 875 aa22.23■■□□□ 1.15
LSM11-201ENST00000286307 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 LRRC2Q9BYS8 371 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 PPIP5K2O43314 1243 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 HIBADHP31937 336 aaKnown RBP22.22■■□□□ 1.15
LSM11-201ENST00000286307 TCIRG1Q13488 830 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 TEX11Q8IYF3 940 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 PANK2Q9BZ23 570 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 MMRN2Q9H8L6 949 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 SETQ01105 290 aaPredicted RBP22.22■■□□□ 1.15
LSM11-201ENST00000286307 HSP90B2PQ58FF3 399 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 STXBP4Q6ZWJ1 553 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 KLF18A0A0U1RQI7 1052 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 USP8P40818 1118 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
LSM11-201ENST00000286307 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 KIF20AO95235 890 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 ZYXQ15942 572 aaKnown RBP22.22■■□□□ 1.15
LSM11-201ENST00000286307 LIMCH1Q9UPQ0 1083 aa22.22■■□□□ 1.15
LSM11-201ENST00000286307 DNAJC10Q8IXB1 793 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 SLC52A2Q9HAB3 445 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 DENND2AQ9ULE3 1009 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 TBCAO75347 108 aaKnown RBP22.21■■□□□ 1.15
LSM11-201ENST00000286307 ALDH1B1P30837 517 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 AMPD3Q01432 767 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 ZBTB21Q9ULJ3 1066 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 CNNM3Q8NE01 707 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 TMEM94Q12767 1356 aa22.21■■□□□ 1.15
LSM11-201ENST00000286307 ZBTB43O43298 467 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 FGFR1OPO95684 399 aaKnown RBP22.2■■□□□ 1.14
LSM11-201ENST00000286307 UBA7P41226 1012 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 MCMDC2Q4G0Z9 681 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 RTN1Q16799 776 aa22.2■■□□□ 1.14
LSM11-201ENST00000286307 MRPL50Q8N5N7 158 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms