RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 TTLL5Q6EMB2 1281 aa19.96■□□□□ 0.79
TRPC1-201ENST00000273482 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
TRPC1-201ENST00000273482 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
TRPC1-201ENST00000273482 ANKRD18BA2A2Z9 1011 aa19.95■□□□□ 0.79
TRPC1-201ENST00000273482 IPO7O95373 1038 aaKnown RBP19.95■□□□□ 0.79
TRPC1-201ENST00000273482 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.79
TRPC1-201ENST00000273482 CEP135Q66GS9 1140 aa19.95■□□□□ 0.79
TRPC1-201ENST00000273482 ACBD3Q9H3P7 528 aa19.95■□□□□ 0.79
TRPC1-201ENST00000273482 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 DACT1Q9NYF0 836 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 PTGS1P23219 599 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 SAFBQ15424 915 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRPC1-201ENST00000273482 ANO6Q4KMQ2 910 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
TRPC1-201ENST00000273482 KLHDC4Q8TBB5 520 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 AKAP2Q9Y2D5 859 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 CHMLP26374 656 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 ANKRD20A12PQ8NF67 263 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 TRERF1Q96PN7 1200 aa19.95■□□□□ 0.78
TRPC1-201ENST00000273482 NEMFO60524 1076 aa19.94■□□□□ 0.78
TRPC1-201ENST00000273482 NOC3LQ8WTT2 800 aaKnown RBP19.94■□□□□ 0.78
TRPC1-201ENST00000273482 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
TRPC1-201ENST00000273482 AK7Q96M32 723 aa19.94■□□□□ 0.78
TRPC1-201ENST00000273482 SYT1P21579 422 aa19.94■□□□□ 0.78
TRPC1-201ENST00000273482 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
TRPC1-201ENST00000273482 PNMA6EA0A0J9YXQ4 647 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 CCDC70Q6NSX1 233 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 GPT2Q8TD30 523 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 KIAA0232Q92628 1395 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 GADD45BO75293 160 aaPredicted RBP19.93■□□□□ 0.78
TRPC1-201ENST00000273482 AK2P54819 239 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 LEKR1Q6ZMV7 388 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 TCEANC2Q96MN5 208 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
TRPC1-201ENST00000273482 MARCH6O60337 910 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 VPS53Q5VIR6 699 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 BICC1Q9H694 974 aaKnown RBP19.92■□□□□ 0.78
TRPC1-201ENST00000273482 KRT222Q8N1A0 295 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 CAMSAP1Q5T5Y3 1602 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 URI1O94763 535 aaPredicted RBP19.92■□□□□ 0.78
TRPC1-201ENST00000273482 TYRO3Q06418 890 aa19.92■□□□□ 0.78
TRPC1-201ENST00000273482 CALCOCO1Q9P1Z2 691 aa19.91■□□□□ 0.78
TRPC1-201ENST00000273482 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
TRPC1-201ENST00000273482 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRPC1-201ENST00000273482 V9GYY5 206 aaPredicted RBP19.91■□□□□ 0.78
TRPC1-201ENST00000273482 CTAGE5O15320 804 aa19.91■□□□□ 0.78
TRPC1-201ENST00000273482 JMYQ8N9B5 988 aa19.91■□□□□ 0.78
TRPC1-201ENST00000273482 BRD1O95696 1058 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 TDO2P48775 406 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 POLR3GO15318 223 aaPredicted RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 GUCY1B3Q02153 619 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 AIDAQ96BJ3 306 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 EVI5LQ96CN4 794 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 GIGYF1O75420 1035 aaPredicted RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 SART3Q15020 963 aaKnown RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 FAM89AQ96GI7 184 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 DNAJC25Q9H1X3 360 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 RIOK3O14730 519 aaKnown RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 SKILP12757 684 aa19.9■□□□□ 0.78
TRPC1-201ENST00000273482 DZIP3Q86Y13 1208 aaKnown RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 CLTCQ00610 1675 aaKnown RBP19.9■□□□□ 0.78
TRPC1-201ENST00000273482 CAVIN2O95810 425 aa19.89■□□□□ 0.78
TRPC1-201ENST00000273482 DNAJC10Q8IXB1 793 aa19.89■□□□□ 0.78
TRPC1-201ENST00000273482 IQSEC3Q9UPP2 1182 aaPredicted RBP19.89■□□□□ 0.78
TRPC1-201ENST00000273482 PHKG2P15735 406 aa19.89■□□□□ 0.77
TRPC1-201ENST00000273482 LUZP1Q86V48 1076 aa19.89■□□□□ 0.77
TRPC1-201ENST00000273482 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
TRPC1-201ENST00000273482 SOS1Q07889 1333 aaPredicted RBP19.89■□□□□ 0.77
TRPC1-201ENST00000273482 SMTNL1A8MU46 457 aa19.89■□□□□ 0.77
TRPC1-201ENST00000273482 SETQ01105 290 aaPredicted RBP19.89■□□□□ 0.77
TRPC1-201ENST00000273482 CBFA2T2O43439 604 aa19.88■□□□□ 0.77
TRPC1-201ENST00000273482 ZSCAN25Q6NSZ9 544 aa19.88■□□□□ 0.77
TRPC1-201ENST00000273482 BABAM1Q9NWV8 329 aa19.88■□□□□ 0.77
TRPC1-201ENST00000273482 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
TRPC1-201ENST00000273482 U2AF2P26368 475 aaKnown RBP eCLIP19.88■□□□□ 0.772e-6■■■■■ 29.3
TRPC1-201ENST00000273482 STX1AQ16623 288 aa19.88■□□□□ 0.77
TRPC1-201ENST00000273482 FSIP1Q8NA03 581 aa19.88■□□□□ 0.77
TRPC1-201ENST00000273482 NIP7Q9Y221 180 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRPC1-201ENST00000273482 BRPF1P55201 1214 aaPredicted RBP19.88■□□□□ 0.77
TRPC1-201ENST00000273482 SNW1Q13573 536 aaKnown RBP19.87■□□□□ 0.77
TRPC1-201ENST00000273482 SKIDA1Q1XH10 827 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 PCMTD1Q96MG8 357 aaPredicted RBP19.87■□□□□ 0.77
TRPC1-201ENST00000273482 IBTKQ9P2D0 1353 aaPredicted RBP19.87■□□□□ 0.77
TRPC1-201ENST00000273482 PRAMEF22A3QJZ6 481 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 PPFIA3O75145 1194 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 CPA1P15085 419 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 GSDMDP57764 484 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 FAM98CQ17RN3 349 aaKnown RBP19.87■□□□□ 0.77
TRPC1-201ENST00000273482 HOXB7P09629 217 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 GTF2F1P35269 517 aaKnown RBP eCLIP19.87■□□□□ 0.77
TRPC1-201ENST00000273482 FEZ1Q99689 392 aa19.87■□□□□ 0.77
TRPC1-201ENST00000273482 SF3B2Q13435 895 aaKnown RBP19.86■□□□□ 0.77
TRPC1-201ENST00000273482 BMS1Q14692 1282 aaKnown RBP19.86■□□□□ 0.77
TRPC1-201ENST00000273482 CCDC171Q6TFL3 1326 aa19.86■□□□□ 0.77
TRPC1-201ENST00000273482 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
TRPC1-201ENST00000273482 ANKIB1Q9P2G1 1089 aa19.86■□□□□ 0.77
TRPC1-201ENST00000273482 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms