RNA–Protein interactions for RNA: ENST00000272430.9

RTKN-202, Transcript of rhotekin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTKN, Length 2,142 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-202ENST00000272430 ZSCAN30Q86W11 494 aa18.35■□□□□ 0.53
RTKN-202ENST00000272430 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
RTKN-202ENST00000272430 HIP1O00291 1037 aa18.35■□□□□ 0.53
RTKN-202ENST00000272430 CHGBP05060 677 aa18.35■□□□□ 0.53
RTKN-202ENST00000272430 AK2P54819 239 aa18.35■□□□□ 0.53
RTKN-202ENST00000272430 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
RTKN-202ENST00000272430 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
RTKN-202ENST00000272430 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
RTKN-202ENST00000272430 JCADQ9P266 1359 aa18.34■□□□□ 0.53
RTKN-202ENST00000272430 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
RTKN-202ENST00000272430 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
RTKN-202ENST00000272430 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
RTKN-202ENST00000272430 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
RTKN-202ENST00000272430 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
RTKN-202ENST00000272430 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
RTKN-202ENST00000272430 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
RTKN-202ENST00000272430 TEX13AQ9BXU3 409 aaPredicted RBP18.34■□□□□ 0.53
RTKN-202ENST00000272430 NUP98P52948 1817 aa18.33■□□□□ 0.52
RTKN-202ENST00000272430 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 ZNF609O15014 1411 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 EYA2O00167 538 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 BRD1O95696 1058 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 STARD3NLO95772 234 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 CYP19A1P11511 503 aaPredicted RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 TRIM28Q13263 835 aaKnown RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
RTKN-202ENST00000272430 HAUS7Q99871 368 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
RTKN-202ENST00000272430 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 EXOC5O00471 708 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 HLFQ16534 295 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 KIF6Q6ZMV9 814 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 GAS2L3Q86XJ1 694 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
RTKN-202ENST00000272430 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
RTKN-202ENST00000272430 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
RTKN-202ENST00000272430 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 LARGE1O95461 756 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
RTKN-202ENST00000272430 TIMM10P62072 90 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
RTKN-202ENST00000272430 MYH3P11055 1940 aa18.3■□□□□ 0.52
RTKN-202ENST00000272430 SLC27A2O14975 620 aa18.3■□□□□ 0.52
RTKN-202ENST00000272430 ADAMTS2O95450 1211 aa18.3■□□□□ 0.52
RTKN-202ENST00000272430 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
RTKN-202ENST00000272430 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
RTKN-202ENST00000272430 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
RTKN-202ENST00000272430 PCCAP05165 728 aaPredicted RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 MSNP26038 577 aaKnown RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 HS1BP3Q53T59 392 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 DDX46Q7L014 1031 aaKnown RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 MTERF4Q7Z6M4 381 aaKnown RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 LIMCH1Q9UPQ0 1083 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 TAF5LO75529 589 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 CIAO1O76071 339 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 KLHL40Q2TBA0 621 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
RTKN-202ENST00000272430 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
RTKN-202ENST00000272430 TCHHQ07283 1943 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
RTKN-202ENST00000272430 SEC62Q99442 399 aaKnown RBP18.28■□□□□ 0.52
RTKN-202ENST00000272430 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 PDRG1Q9NUG6 133 aa18.28■□□□□ 0.52
RTKN-202ENST00000272430 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
RTKN-202ENST00000272430 GPTP24298 496 aa18.27■□□□□ 0.52
RTKN-202ENST00000272430 KCNJ4P48050 445 aa18.27■□□□□ 0.52
RTKN-202ENST00000272430 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.52
RTKN-202ENST00000272430 ZBTB38Q8NAP3 1195 aaPredicted RBP18.27■□□□□ 0.52
RTKN-202ENST00000272430 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
RTKN-202ENST00000272430 SLIT2O94813 1529 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
RTKN-202ENST00000272430 ST3GAL1Q11201 340 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 SLFNL1Q499Z3 407 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 NLRP10Q86W26 655 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 CSF1RP07333 972 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
RTKN-202ENST00000272430 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
RTKN-202ENST00000272430 DTNBO60941 627 aa18.25■□□□□ 0.51
RTKN-202ENST00000272430 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
RTKN-202ENST00000272430 USPL1Q5W0Q7 1092 aa18.25■□□□□ 0.51
RTKN-202ENST00000272430 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
RTKN-202ENST00000272430 GOLIM4O00461 696 aa18.25■□□□□ 0.51
RTKN-202ENST00000272430 CCDC57Q2TAC2 916 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms