RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.33
PDPK1-201ENST00000268673 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.33
PDPK1-201ENST00000268673 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.33
PDPK1-201ENST00000268673 MYD88Q99836 296 aa17.08■□□□□ 0.33
PDPK1-201ENST00000268673 TUBB4BP68371 445 aa17.08■□□□□ 0.32
PDPK1-201ENST00000268673 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.32
PDPK1-201ENST00000268673 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
PDPK1-201ENST00000268673 SYKP43405 635 aa17.08■□□□□ 0.32
PDPK1-201ENST00000268673 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
PDPK1-201ENST00000268673 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
PDPK1-201ENST00000268673 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 CLEC17AQ6ZS10 378 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
PDPK1-201ENST00000268673 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 GOLGA1Q92805 767 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
PDPK1-201ENST00000268673 GTF3C6Q969F1 213 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 PDLIM2Q96JY6 352 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 NMIQ13287 307 aaPredicted RBP17.06■□□□□ 0.32
PDPK1-201ENST00000268673 Q6ZUG5 572 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ZSWIM4Q9H7M6 989 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 TNRQ92752 1358 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 TDO2P48775 406 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
PDPK1-201ENST00000268673 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 CPA1P15085 419 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ELF2Q15723 593 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ABCF2Q9UG63 623 aa17.06■□□□□ 0.32
PDPK1-201ENST00000268673 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 EPS15P42566 896 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
PDPK1-201ENST00000268673 CHL1O00533 1208 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
PDPK1-201ENST00000268673 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
PDPK1-201ENST00000268673 MCM6Q14566 821 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 FAM160A1Q05DH4 1040 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 CEP112Q8N8E3 955 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 RASSF4Q9H2L5 321 aa17.05■□□□□ 0.32
PDPK1-201ENST00000268673 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 RGS12O14924 1447 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 YEATS4O95619 227 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 CAPN2P17655 700 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 IL13P35225 146 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 GTF2A1P52655 376 aaPredicted RBP17.04■□□□□ 0.32
PDPK1-201ENST00000268673 CUL4AQ13619 759 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
PDPK1-201ENST00000268673 IMPACTQ9P2X3 320 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 AKAP2Q9Y2D5 859 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 ZNF213O14771 459 aa17.04■□□□□ 0.32
PDPK1-201ENST00000268673 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 TUBBP07437 444 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 A0A087WZG4 1122 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CCDC196A0A1B0GTZ2 297 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CTAGE15A4D2H0 777 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 ERLIN2O94905 339 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CTAGE8P0CG41 777 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CTAGE6Q86UF2 777 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CTAGE4Q8IX94 777 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 CHAMP1Q96JM3 812 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 TM6SF1Q9BZW5 370 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 ABCA8O94911 1581 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 SPTLC2O15270 562 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 HSP90AB3PQ58FF7 597 aa17.03■□□□□ 0.32
PDPK1-201ENST00000268673 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
PDPK1-201ENST00000268673 MICALCLQ6ZW33 695 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 G2E3Q7L622 706 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 ZNF652Q9Y2D9 606 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 SPA17Q15506 151 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 KIAA1524Q8TCG1 905 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 CCDC175P0C221 793 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 NPATQ14207 1427 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
PDPK1-201ENST00000268673 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
PDPK1-201ENST00000268673 EXOC5O00471 708 aa17.02■□□□□ 0.31
PDPK1-201ENST00000268673 EVCP57679 992 aa17.02■□□□□ 0.31
PDPK1-201ENST00000268673 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.31
PDPK1-201ENST00000268673 FAM173BQ6P4H8 233 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 ABCC1P33527 1531 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms