RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NSFL1CQ9UNZ2 370 aaKnown RBP17.91■□□□□ 0.46
TIMP3-201ENST00000266085 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 CDR1P51861 262 aa17.9■□□□□ 0.46
TIMP3-201ENST00000266085 NLRP5P59047 1200 aa17.9■□□□□ 0.46
TIMP3-201ENST00000266085 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
TIMP3-201ENST00000266085 GNPATO15228 680 aa17.9■□□□□ 0.46
TIMP3-201ENST00000266085 ZNF771Q7L3S4 317 aaPredicted RBP17.9■□□□□ 0.46
TIMP3-201ENST00000266085 CCDC194A0A1B0GVG4 234 aa17.9■□□□□ 0.46
TIMP3-201ENST00000266085 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
TIMP3-201ENST00000266085 METAP2P50579 478 aaKnown RBP eCLIP17.9■□□□□ 0.46
TIMP3-201ENST00000266085 NAA16Q6N069 864 aaPredicted RBP17.9■□□□□ 0.46
TIMP3-201ENST00000266085 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
TIMP3-201ENST00000266085 NMIQ13287 307 aaPredicted RBP17.89■□□□□ 0.46
TIMP3-201ENST00000266085 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.46
TIMP3-201ENST00000266085 C8orf34Q49A92 452 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 KLF18A0A0U1RQI7 1052 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 SLC4A4Q9Y6R1 1079 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 USP19O94966 1318 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 CTAGE5O15320 804 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.45
TIMP3-201ENST00000266085 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
TIMP3-201ENST00000266085 CFAP74Q9C0B2 1584 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 KIF5BP33176 963 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
TIMP3-201ENST00000266085 PDCL3Q9H2J4 239 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 VAT1LQ9HCJ6 419 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 CCDC112Q8NEF3 446 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 RAB34Q9BZG1 259 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 EFCAB6Q5THR3 1501 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 CHD1O14646 1710 aa17.88■□□□□ 0.45
TIMP3-201ENST00000266085 F8W031 263 aaPredicted RBP17.87■□□□□ 0.45
TIMP3-201ENST00000266085 TIMM10P62072 90 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
TIMP3-201ENST00000266085 WWC2Q6AWC2 1192 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 ERCC4Q92889 916 aaPredicted RBP17.87■□□□□ 0.45
TIMP3-201ENST00000266085 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 HLA-DOAP06340 250 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 TMEM94Q12767 1356 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 EIF4A1P60842 406 aaKnown RBP17.87■□□□□ 0.45
TIMP3-201ENST00000266085 FSIP1Q8NA03 581 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 MAP7D2Q96T17 732 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 SH3TC1Q8TE82 1336 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 GSTO1P78417 241 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 KLHDC4Q8TBB5 520 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 SLC26A6Q9BXS9 759 aa17.87■□□□□ 0.45
TIMP3-201ENST00000266085 ZC3H12CQ9C0D7 883 aaKnown RBP17.87■□□□□ 0.45
TIMP3-201ENST00000266085 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 WTAPQ15007 396 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 TXLNBQ8N3L3 684 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 NBPF7P0C2Y1 421 aaPredicted RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 FEZ1Q99689 392 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
TIMP3-201ENST00000266085 KLHL10Q6JEL2 608 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
TIMP3-201ENST00000266085 ESR2Q92731 530 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 EYA2O00167 538 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 ZSCAN30Q86W11 494 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
TIMP3-201ENST00000266085 TRAPPC3LQ5T215 181 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 CNNM3Q8NE01 707 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 CABP5Q9NP86 173 aa17.85■□□□□ 0.45
TIMP3-201ENST00000266085 ZBTB43O43298 467 aa17.84■□□□□ 0.45
TIMP3-201ENST00000266085 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 KRT23Q9C075 422 aa17.84■□□□□ 0.45
TIMP3-201ENST00000266085 CHMLP26374 656 aa17.84■□□□□ 0.45
TIMP3-201ENST00000266085 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 CCDC12Q8WUD4 166 aaPredicted RBP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 RDXP35241 583 aaKnown RBP17.84■□□□□ 0.45
TIMP3-201ENST00000266085 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
TIMP3-201ENST00000266085 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
TIMP3-201ENST00000266085 WWC3Q9ULE0 1092 aa17.83■□□□□ 0.45
TIMP3-201ENST00000266085 KCNQ3O43525 872 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 UBE2HP62256 183 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 KLHL40Q2TBA0 621 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 ROBO2Q9HCK4 1378 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 TMTC2Q8N394 836 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 SNX21Q969T3 373 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 ZMYM4Q5VZL5 1548 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 MIGA1Q8NAN2 632 aa17.83■□□□□ 0.44
TIMP3-201ENST00000266085 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 A0A1B0GUL7 405 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
TIMP3-201ENST00000266085 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
TIMP3-201ENST00000266085 TNIP1Q15025 636 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms