RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 ZBTB16Q05516 673 aa20.52■□□□□ 0.88
ITGA6-201ENST00000264107 STMN2Q93045 179 aa20.52■□□□□ 0.88
ITGA6-201ENST00000264107 SMC6Q96SB8 1091 aa20.52■□□□□ 0.88
ITGA6-201ENST00000264107 KRT83P78385 493 aa20.52■□□□□ 0.87
ITGA6-201ENST00000264107 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.87
ITGA6-201ENST00000264107 CEP128Q6ZU80 1094 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 GAS2L3Q86XJ1 694 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 PHAXQ9H814 394 aaKnown RBP20.51■□□□□ 0.87
ITGA6-201ENST00000264107 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 MAP3K1Q13233 1512 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 GOLGA6BA6NDN3 693 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 TUBB2AQ13885 445 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 TUBB2BQ9BVA1 445 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 SLC12A5Q9H2X9 1139 aa20.51■□□□□ 0.87
ITGA6-201ENST00000264107 VIMP08670 466 aaKnown RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 SLC8A1P32418 973 aa20.5■□□□□ 0.87
ITGA6-201ENST00000264107 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 RIPOR2Q9Y4F9 1068 aa20.5■□□□□ 0.87
ITGA6-201ENST00000264107 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
ITGA6-201ENST00000264107 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
ITGA6-201ENST00000264107 NOL3O60936 208 aaKnown RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 KIF5AQ12840 1032 aa20.5■□□□□ 0.87
ITGA6-201ENST00000264107 IFI16Q16666 785 aaKnown RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 INTS4Q96HW7 963 aaKnown RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 CTDP1Q9Y5B0 961 aaPredicted RBP20.5■□□□□ 0.87
ITGA6-201ENST00000264107 TLDC2A0PJX2 215 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 MACROD2A1Z1Q3 448 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 SMIM23A6NLE4 172 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 INTS8Q75QN2 995 aaKnown RBP20.49■□□□□ 0.87
ITGA6-201ENST00000264107 EFCAB13Q8IY85 973 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
ITGA6-201ENST00000264107 SELENOOQ9BVL4 669 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 HNRNPH2P55795 449 aaKnown RBP20.49■□□□□ 0.87
ITGA6-201ENST00000264107 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
ITGA6-201ENST00000264107 HOMER2Q9NSB8 354 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
ITGA6-201ENST00000264107 KCNG4Q8TDN1 519 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 TACO1Q9BSH4 297 aaKnown RBP20.48■□□□□ 0.87
ITGA6-201ENST00000264107 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
ITGA6-201ENST00000264107 RPUSD2Q8IZ73 545 aaKnown RBP20.48■□□□□ 0.87
ITGA6-201ENST00000264107 NAPGQ99747 312 aaPredicted RBP20.48■□□□□ 0.87
ITGA6-201ENST00000264107 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 TMEM63CQ9P1W3 806 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 PPFIA1Q13136 1202 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 NEDD9Q14511 834 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 BRD3Q15059 726 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 DBN1Q16643 649 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 SH2D4BQ5SQS7 431 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 DZIP1Q86YF9 867 aaKnown RBP20.47■□□□□ 0.87
ITGA6-201ENST00000264107 CEP120Q8N960 986 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 ZSCAN25Q6NSZ9 544 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 GBP5Q96PP8 586 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
ITGA6-201ENST00000264107 TRIM4Q9C037 500 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 CBX8Q9HC52 389 aa20.47■□□□□ 0.87
ITGA6-201ENST00000264107 TPX2Q9ULW0 747 aaKnown RBP20.47■□□□□ 0.87
ITGA6-201ENST00000264107 SPAG1Q07617 926 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 MCTP2Q6DN12 878 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 RASAL2Q9UJF2 1139 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 PPFIA3O75145 1194 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 RFC1P35251 1148 aaPredicted RBP20.46■□□□□ 0.87
ITGA6-201ENST00000264107 ODF2LQ9ULJ1 636 aa20.46■□□□□ 0.87
ITGA6-201ENST00000264107 SNCBQ16143 134 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 KIAA1107Q9UPP5 1409 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 UBLCP1Q8WVY7 318 aaPredicted RBP20.45■□□□□ 0.86
ITGA6-201ENST00000264107 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 ACTN2P35609 894 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 CFAP70Q5T0N1 1121 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 CCDC77Q9BR77 488 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 E7EVH7 732 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 GNGT1P63211 74 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 TBC1D31Q96DN5 1066 aa20.45■□□□□ 0.86
ITGA6-201ENST00000264107 FCHSD2O94868 740 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 RAD50Q92878 1312 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 PPP1R14CQ8TAE6 165 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 KCNK9Q9NPC2 374 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 TERF2Q15554 542 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 SPATS2Q86XZ4 545 aaKnown RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 TRIM47Q96LD4 638 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 LOC102724159A0A0B4J2E5 919 aa20.44■□□□□ 0.86
ITGA6-201ENST00000264107 PDE1CQ14123 709 aaPredicted RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 PWP2Q15269 919 aaKnown RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 SYTL4Q96C24 671 aaPredicted RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 JPH2Q9BR39 696 aaPredicted RBP20.44■□□□□ 0.86
ITGA6-201ENST00000264107 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms