RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 H3BQV1 296 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 SGSM2O43147 1006 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 MAP2K2P36507 400 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 SEMA3FQ13275 785 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 IFFO2Q5TF58 517 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 ZNF530Q6P9A1 599 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-201ENST00000263071 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-201ENST00000263071 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.24
SCARF1-201ENST00000263071 MAP2P11137 1827 aaKnown RBP16.57■□□□□ 0.24
SCARF1-201ENST00000263071 AP5Z1O43299 807 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 LIG1P18858 919 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 UBE2HP62256 183 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCARF1-201ENST00000263071 CUL4AQ13619 759 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 KCNF1Q9H3M0 494 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 TAF6LQ9Y6J9 622 aa16.57■□□□□ 0.24
SCARF1-201ENST00000263071 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 RGS12O14924 1447 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 ME3Q16798 604 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 SRLQ86TD4 932 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 CCDC186Q7Z3E2 898 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 RBM8AQ9Y5S9 174 aaKnown RBP16.56■□□□□ 0.24
SCARF1-201ENST00000263071 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
SCARF1-201ENST00000263071 TLR7Q9NYK1 1049 aaKnown RBP16.55■□□□□ 0.24
SCARF1-201ENST00000263071 EID1Q9Y6B2 187 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 ZBTB12Q9Y330 459 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-201ENST00000263071 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 AK7Q96M32 723 aa16.55■□□□□ 0.24
SCARF1-201ENST00000263071 TRMT1Q9NXH9 659 aaKnown RBP16.55■□□□□ 0.24
SCARF1-201ENST00000263071 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-201ENST00000263071 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 INTS4Q96HW7 963 aaKnown RBP16.54■□□□□ 0.24
SCARF1-201ENST00000263071 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 NUP62CLQ9H1M0 184 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 RPAINQ86UA6 219 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 RAD50Q92878 1312 aa16.54■□□□□ 0.24
SCARF1-201ENST00000263071 JAK2O60674 1132 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 BIRC2Q13490 618 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 SGSM3Q96HU1 749 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 NEUROD6Q96NK8 337 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-201ENST00000263071 MED4Q9NPJ6 270 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 TPCN1Q9ULQ1 816 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 SETD1BQ9UPS6 1966 aaKnown RBP16.53■□□□□ 0.24
SCARF1-201ENST00000263071 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
SCARF1-201ENST00000263071 ANAPC15P60006 121 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
SCARF1-201ENST00000263071 KRT85P78386 507 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 BLOC1S2Q6QNY1 142 aa16.53■□□□□ 0.24
SCARF1-201ENST00000263071 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
SCARF1-201ENST00000263071 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
SCARF1-201ENST00000263071 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.24
SCARF1-201ENST00000263071 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
SCARF1-201ENST00000263071 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
SCARF1-201ENST00000263071 TTC6Q86TZ1 520 aa16.52■□□□□ 0.24
SCARF1-201ENST00000263071 FTOQ9C0B1 505 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCARF1-201ENST00000263071 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.24
SCARF1-201ENST00000263071 SH3BP1Q9Y3L3 701 aa16.52■□□□□ 0.24
SCARF1-201ENST00000263071 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-201ENST00000263071 PSME1Q06323 249 aa16.52■□□□□ 0.23
SCARF1-201ENST00000263071 ISM2Q6H9L7 571 aa16.52■□□□□ 0.23
SCARF1-201ENST00000263071 PACS2Q86VP3 889 aa16.52■□□□□ 0.23
SCARF1-201ENST00000263071 RAI14Q9P0K7 980 aa16.52■□□□□ 0.23
SCARF1-201ENST00000263071 MTMR6Q9Y217 621 aa16.52■□□□□ 0.23
SCARF1-201ENST00000263071 HOXC9P31274 260 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 LMAN1P49257 510 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 LEKR1Q6ZMV7 388 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 SMARCE1Q969G3 411 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 ERO1AQ96HE7 468 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms