RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IGSF1Q8N6C5 1336 aa17.58■□□□□ 0.41
XRCC1-201ENST00000262887 BECN2A8MW95 431 aa17.58■□□□□ 0.41
XRCC1-201ENST00000262887 C11orf57Q6ZUT1 292 aaPredicted RBP17.58■□□□□ 0.41
XRCC1-201ENST00000262887 FAM227BQ96M60 508 aa17.58■□□□□ 0.41
XRCC1-201ENST00000262887 USP16Q9Y5T5 823 aa17.58■□□□□ 0.41
XRCC1-201ENST00000262887 LRRC37A3O60309 1634 aa17.58■□□□□ 0.41
XRCC1-201ENST00000262887 NALCNQ8IZF0 1738 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 TULP2O00295 520 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 NPHP1O15259 732 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 KCND1Q9NSA2 647 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 USP6P35125 1406 aa17.58■□□□□ 0.4
XRCC1-201ENST00000262887 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
XRCC1-201ENST00000262887 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
XRCC1-201ENST00000262887 RPS6KB1P23443 525 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 CYP2C19P33261 490 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 AMPHP49418 695 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 STX1AQ16623 288 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 SBNO1A3KN83 1393 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 H2AFXP16104 143 aaPredicted RBP17.57■□□□□ 0.4
XRCC1-201ENST00000262887 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
XRCC1-201ENST00000262887 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
XRCC1-201ENST00000262887 SIRT1Q96EB6 747 aa17.57■□□□□ 0.4
XRCC1-201ENST00000262887 TOB2Q14106 344 aaPredicted RBP17.56■□□□□ 0.4
XRCC1-201ENST00000262887 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
XRCC1-201ENST00000262887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
XRCC1-201ENST00000262887 HIP1O00291 1037 aa17.56■□□□□ 0.4
XRCC1-201ENST00000262887 GIGYF1O75420 1035 aaPredicted RBP17.56■□□□□ 0.4
XRCC1-201ENST00000262887 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
XRCC1-201ENST00000262887 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
XRCC1-201ENST00000262887 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 FMN2Q9NZ56 1722 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 TECPR2O15040 1411 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 PI4KAP2A4QPH2 592 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 H3BQV1 296 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 CAPN2P17655 700 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 RESTQ13127 1097 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 SNW1Q13573 536 aaKnown RBP17.55■□□□□ 0.4
XRCC1-201ENST00000262887 ERCC6LQ2NKX8 1250 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 AACSQ86V21 672 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 PI4KAP1Q8N8J0 262 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 L2HGDHQ9H9P8 463 aa17.55■□□□□ 0.4
XRCC1-201ENST00000262887 CTAGE5O15320 804 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 JAK2O60674 1132 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 BRF1Q92994 677 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 FHOD1Q9Y613 1164 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 GSDMDP57764 484 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 CEBPZQ03701 1054 aaKnown RBP17.54■□□□□ 0.4
XRCC1-201ENST00000262887 DDX11Q96FC9 970 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 TSPYL1Q9H0U9 437 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
XRCC1-201ENST00000262887 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
XRCC1-201ENST00000262887 ALDH8A1Q9H2A2 487 aaPredicted RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
XRCC1-201ENST00000262887 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 ADCY9O60503 1353 aa17.53■□□□□ 0.4
XRCC1-201ENST00000262887 NPHP4O75161 1426 aaPredicted RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 A0A0D9SFI3 127 aa17.53■□□□□ 0.4
XRCC1-201ENST00000262887 CLCN6P51797 869 aa17.53■□□□□ 0.4
XRCC1-201ENST00000262887 HNRNPH2P55795 449 aaKnown RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
XRCC1-201ENST00000262887 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
XRCC1-201ENST00000262887 MTX1Q13505 466 aa17.52■□□□□ 0.39
XRCC1-201ENST00000262887 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.39
XRCC1-201ENST00000262887 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.52■□□□□ 0.39
XRCC1-201ENST00000262887 PNMA6AP0CW24 399 aaPredicted RBP17.51■□□□□ 0.39
XRCC1-201ENST00000262887 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 ANO10Q9NW15 660 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 A0A087WWV3 80 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
XRCC1-201ENST00000262887 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
XRCC1-201ENST00000262887 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
XRCC1-201ENST00000262887 SNRKQ9NRH2 765 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 HMG20BQ9P0W2 317 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 PLA2G4AP47712 749 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-201ENST00000262887 SYT10Q6XYQ8 523 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 AOPEPQ8N6M6 819 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 PPP1R13BQ96KQ4 1090 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-201ENST00000262887 IMPACTQ9P2X3 320 aa17.5■□□□□ 0.39
XRCC1-201ENST00000262887 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
XRCC1-201ENST00000262887 ARHGAP29Q52LW3 1261 aa17.49■□□□□ 0.39
XRCC1-201ENST00000262887 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
XRCC1-201ENST00000262887 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
XRCC1-201ENST00000262887 GOLPH3LQ9H4A5 285 aa17.49■□□□□ 0.39
XRCC1-201ENST00000262887 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
XRCC1-201ENST00000262887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■□□□□ 11.3
XRCC1-201ENST00000262887 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms