RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 EIF4G2P78344 907 aaKnown RBP eCLIP6.96□□□□□ -1.29
ITCH-201ENST00000262650 NEXNQ0ZGT2 675 aa6.96□□□□□ -1.29
ITCH-201ENST00000262650 PIGBQ92521 554 aa6.96□□□□□ -1.29
ITCH-201ENST00000262650 EYA1Q99502 592 aa6.96□□□□□ -1.29
ITCH-201ENST00000262650 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.29
ITCH-201ENST00000262650 PRKRIP1Q9H875 184 aaPredicted RBP6.96□□□□□ -1.29
ITCH-201ENST00000262650 GEMIN8Q9NWZ8 242 aaKnown RBP6.96□□□□□ -1.29
ITCH-201ENST00000262650 AFDNP55196 1824 aaKnown RBP6.96□□□□□ -1.3
ITCH-201ENST00000262650 KDM6AO15550 1401 aaPredicted RBP6.96□□□□□ -1.3
ITCH-201ENST00000262650 PHKG2P15735 406 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 TDO2P48775 406 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 UVSSAQ2YD98 709 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 NAALADL2Q58DX5 795 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 LTV1Q96GA3 475 aaPredicted RBP6.96□□□□□ -1.3
ITCH-201ENST00000262650 SYNPO2Q9UMS6 1093 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
ITCH-201ENST00000262650 CNTNAP4Q9C0A0 1308 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 CCDC189A1A4V9 331 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 TRIM66O15016 1216 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.31e-6■□□□□ 11.2
ITCH-201ENST00000262650 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
ITCH-201ENST00000262650 C1QTNF8P60827 252 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 SWAP70Q9UH65 585 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 EGFLAMQ63HQ2 1017 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 ICE2Q659A1 982 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 TNRC6CQ9HCJ0 1690 aaKnown RBP6.95□□□□□ -1.3
ITCH-201ENST00000262650 PXDNLA1KZ92 1463 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 ZRSR2Q15696 482 aaKnown RBP6.95□□□□□ -1.3
ITCH-201ENST00000262650 IFNL2Q8IZJ0 200 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 USHBP1Q8N6Y0 703 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 SCYL1Q96KG9 808 aa6.95□□□□□ -1.3
ITCH-201ENST00000262650 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
ITCH-201ENST00000262650 NPC1L1Q9UHC9 1359 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 ANP32AP39687 249 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 EIF4A2Q14240 407 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 AMIGO3Q86WK7 504 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 LINC00116Q8NCU8 138 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 KCNB2Q92953 911 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 SPACA7Q96KW9 195 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 WWC3Q9ULE0 1092 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 ZBTB12Q9Y330 459 aaPredicted RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 SCN7AQ01118 1682 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 KCPQ6ZWJ8 1503 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 DICER1Q9UPY3 1922 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 BCORQ6W2J9 1755 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 COL3A1P02461 1466 aaPredicted RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 SF3A1Q15459 793 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 PTPROQ16827 1216 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
ITCH-201ENST00000262650 PUF60Q9UHX1 559 aaKnown RBP6.94□□□□□ -1.3
ITCH-201ENST00000262650 LOC102724428A0A0B4J2F2 783 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 HSP90AB1P08238 724 aaKnown RBP6.93□□□□□ -1.3
ITCH-201ENST00000262650 SIK1P57059 783 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 IGBP1P78318 339 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 POLA2Q14181 598 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
ITCH-201ENST00000262650 POU5F1Q01860 360 aaKnown RBP6.93□□□□□ -1.3
ITCH-201ENST00000262650 ITPK1Q13572 414 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 AMOTQ4VCS5 1084 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 TAF3Q5VWG9 929 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 CCDC146Q8IYE0 955 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ITCH-201ENST00000262650 CT47B1P0C2W7 299 aaPredicted RBP6.92□□□□□ -1.3
ITCH-201ENST00000262650 TTC30BQ8N4P2 665 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 DCAF5Q96JK2 942 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 KCNQ4P56696 695 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 SLC20A2Q08357 652 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 C1orf131Q8NDD1 294 aaKnown RBP6.92□□□□□ -1.3
ITCH-201ENST00000262650 SLC4A9Q96Q91 983 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
ITCH-201ENST00000262650 TGFB2P61812 414 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 PDAP1Q13442 181 aaKnown RBP6.92□□□□□ -1.3
ITCH-201ENST00000262650 GPR162Q16538 588 aa6.92□□□□□ -1.3
ITCH-201ENST00000262650 SATB1Q01826 763 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 SYTL4Q96C24 671 aaPredicted RBP6.91□□□□□ -1.3
ITCH-201ENST00000262650 TMOD3Q9NYL9 352 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 ANKRD31Q8N7Z5 1873 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 SYNRGQ9UMZ2 1314 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 RPS6KA4O75676 772 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 MPRIPQ6WCQ1 1025 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 NOP9Q86U38 636 aaKnown RBP6.91□□□□□ -1.3
ITCH-201ENST00000262650 WDR90Q96KV7 1748 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 MRVI1Q9Y6F6 885 aa6.91□□□□□ -1.3
ITCH-201ENST00000262650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 IL13P35225 146 aa6.9□□□□□ -1.3
ITCH-201ENST00000262650 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 ENOX1Q8TC92 643 aaKnown RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 ASAP1Q9ULH1 1129 aa6.9□□□□□ -1.3
ITCH-201ENST00000262650 PLEKHO1Q53GL0 409 aaPredicted RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 RPAINQ86UA6 219 aa6.9□□□□□ -1.3
ITCH-201ENST00000262650 RSPH9Q9H1X1 276 aaPredicted RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.3
ITCH-201ENST00000262650 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.3
ITCH-201ENST00000262650 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.3
ITCH-201ENST00000262650 KIF7Q2M1P5 1343 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms