RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 H3BQV1 296 aa19.33■□□□□ 0.69
VSX2-201ENST00000261980 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.69
VSX2-201ENST00000261980 IFFO2Q5TF58 517 aa19.33■□□□□ 0.69
VSX2-201ENST00000261980 RHPN1Q8TCX5 695 aa19.33■□□□□ 0.69
VSX2-201ENST00000261980 SCAND2PQ9GZW5 306 aaPredicted RBP19.33■□□□□ 0.69
VSX2-201ENST00000261980 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
VSX2-201ENST00000261980 GTF2A1P52655 376 aaPredicted RBP19.33■□□□□ 0.68
VSX2-201ENST00000261980 SOS1Q07889 1333 aaPredicted RBP19.32■□□□□ 0.68
VSX2-201ENST00000261980 SART3Q15020 963 aaKnown RBP19.32■□□□□ 0.68
VSX2-201ENST00000261980 IFNKQ9P0W0 207 aa19.32■□□□□ 0.68
VSX2-201ENST00000261980 FOXR1Q6PIV2 292 aa19.32■□□□□ 0.68
VSX2-201ENST00000261980 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
VSX2-201ENST00000261980 SECISBP2LQ93073 1101 aaKnown RBP19.32■□□□□ 0.68
VSX2-201ENST00000261980 DRC1Q96MC2 740 aa19.32■□□□□ 0.68
VSX2-201ENST00000261980 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
VSX2-201ENST00000261980 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
VSX2-201ENST00000261980 KIF24Q5T7B8 1368 aa19.31■□□□□ 0.68
VSX2-201ENST00000261980 ZKSCAN1P17029 563 aaPredicted RBP19.31■□□□□ 0.68
VSX2-201ENST00000261980 SMC1AQ14683 1233 aaKnown RBP19.31■□□□□ 0.68
VSX2-201ENST00000261980 VPS53Q5VIR6 699 aa19.31■□□□□ 0.68
VSX2-201ENST00000261980 GOLPH3LQ9H4A5 285 aa19.31■□□□□ 0.68
VSX2-201ENST00000261980 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
VSX2-201ENST00000261980 HSP90B1P14625 803 aaKnown RBP19.31■□□□□ 0.68
VSX2-201ENST00000261980 BRF1Q92994 677 aa19.31■□□□□ 0.68
VSX2-201ENST00000261980 TPM4P67936 248 aa19.3■□□□□ 0.68
VSX2-201ENST00000261980 ARMCX5Q6P1M9 558 aa19.3■□□□□ 0.68
VSX2-201ENST00000261980 XPO4Q9C0E2 1151 aaKnown RBP19.3■□□□□ 0.68
VSX2-201ENST00000261980 ARGLU1Q9NWB6 273 aaPredicted RBP19.3■□□□□ 0.68
VSX2-201ENST00000261980 ORC3Q9UBD5 711 aaPredicted RBP19.3■□□□□ 0.68
VSX2-201ENST00000261980 PHACTR2O75167 634 aa19.3■□□□□ 0.68
VSX2-201ENST00000261980 DHX40Q8IX18 779 aaKnown RBP19.3■□□□□ 0.68
VSX2-201ENST00000261980 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
VSX2-201ENST00000261980 EVCP57679 992 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 E2F4Q16254 413 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 COG3Q96JB2 828 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 USP44Q9H0E7 712 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 FANCGO15287 622 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 ANXA1P04083 346 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
VSX2-201ENST00000261980 HSP90AB2PQ58FF8 381 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 TXLNBQ8N3L3 684 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
VSX2-201ENST00000261980 SH2B1Q9NRF2 756 aaPredicted RBP19.29■□□□□ 0.68
VSX2-201ENST00000261980 TTC21AQ8NDW8 1320 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 MCM6Q14566 821 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 NBPF11Q86T75 865 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 MRFAP1L1Q96HT8 127 aa19.29■□□□□ 0.68
VSX2-201ENST00000261980 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
VSX2-201ENST00000261980 CREB3L3Q68CJ9 461 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 ZSWIM6Q9HCJ5 1215 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 PA2G4Q9UQ80 394 aaKnown RBP19.28■□□□□ 0.68
VSX2-201ENST00000261980 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
VSX2-201ENST00000261980 STX1AQ16623 288 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 WWC2Q6AWC2 1192 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 TSPYL1Q9H0U9 437 aa19.28■□□□□ 0.68
VSX2-201ENST00000261980 ME1P48163 572 aa19.27■□□□□ 0.68
VSX2-201ENST00000261980 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
VSX2-201ENST00000261980 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.68
VSX2-201ENST00000261980 RRP15Q9Y3B9 282 aaKnown RBP19.27■□□□□ 0.68
VSX2-201ENST00000261980 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
VSX2-201ENST00000261980 ZRANB2O95218 330 aaKnown RBP eCLIP19.27■□□□□ 0.68
VSX2-201ENST00000261980 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
VSX2-201ENST00000261980 KINO60870 393 aaKnown RBP19.26■□□□□ 0.67
VSX2-201ENST00000261980 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 CHGBP05060 677 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 GPS2Q13227 327 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 C3P01024 1663 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 CASQ1P31415 396 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 A0A1B0GVL5 298 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 PRR29P0C7W0 189 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 NOP2P46087 812 aaKnown RBP19.26■□□□□ 0.67
VSX2-201ENST00000261980 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
VSX2-201ENST00000261980 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 L2HGDHQ9H9P8 463 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 ADAM21Q9UKJ8 722 aa19.26■□□□□ 0.67
VSX2-201ENST00000261980 NEMFO60524 1076 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
VSX2-201ENST00000261980 EP400NLQ6ZTU2 488 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
VSX2-201ENST00000261980 VPS18Q9P253 973 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 PDCP20941 246 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
VSX2-201ENST00000261980 ELP1O95163 1332 aa19.25■□□□□ 0.67
VSX2-201ENST00000261980 H3BQF6 201 aa19.24■□□□□ 0.67
VSX2-201ENST00000261980 ATP1A3P13637 1013 aa19.24■□□□□ 0.67
VSX2-201ENST00000261980 CEP57L1Q8IYX8 460 aa19.24■□□□□ 0.67
VSX2-201ENST00000261980 FSIP1Q8NA03 581 aa19.24■□□□□ 0.67
VSX2-201ENST00000261980 SUGCTQ9HAC7 445 aa19.24■□□□□ 0.67
VSX2-201ENST00000261980 CDC25BP30305 580 aa19.23■□□□□ 0.67
VSX2-201ENST00000261980 CCDC93Q567U6 631 aa19.23■□□□□ 0.67
VSX2-201ENST00000261980 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms