RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CAMK4Q16566 473 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 TFIP11Q9UBB9 837 aaKnown RBP19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 RNF20Q5VTR2 975 aa19.48■□□□□ 0.71
TM9SF1-201ENST00000261789 KIAA2012Q0VF49 1180 aa19.48■□□□□ 0.71
TM9SF1-201ENST00000261789 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
TM9SF1-201ENST00000261789 LRP10Q7Z4F1 713 aa19.48■□□□□ 0.71
TM9SF1-201ENST00000261789 KDM4AO75164 1064 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 CSB-PGBD3P0DP91 1061 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 LIG1P18858 919 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 SLFNL1Q499Z3 407 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 TNNI3KQ59H18 835 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 FPGT-TNNI3KV9GXZ4 949 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 CSPP1Q1MSJ5 1256 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 DBNDD2Q9BQY9 259 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 FAM13BQ9NYF5 915 aa19.47■□□□□ 0.71
TM9SF1-201ENST00000261789 JAK2O60674 1132 aa19.46■□□□□ 0.71
TM9SF1-201ENST00000261789 MEGF6O75095 1541 aa19.46■□□□□ 0.71
TM9SF1-201ENST00000261789 KRT85P78386 507 aa19.46■□□□□ 0.71
TM9SF1-201ENST00000261789 DDX46Q7L014 1031 aaKnown RBP19.46■□□□□ 0.71
TM9SF1-201ENST00000261789 LRRC2Q9BYS8 371 aa19.46■□□□□ 0.71
TM9SF1-201ENST00000261789 A0A087WZG4 1122 aa19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 CYP27B1O15528 508 aa19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 COPRSQ9NQ92 184 aa19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
TM9SF1-201ENST00000261789 ATP5JP18859 108 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 TERF1P54274 439 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 DNTTIP2Q5QJE6 756 aaKnown RBP19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 DDX11Q96FC9 970 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 ANKRD1Q15327 319 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 CKAP2LQ8IYA6 745 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
TM9SF1-201ENST00000261789 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
TM9SF1-201ENST00000261789 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
TM9SF1-201ENST00000261789 ZNF609O15014 1411 aa19.43■□□□□ 0.7
TM9SF1-201ENST00000261789 STRCP1A6NGW2 1772 aa19.43■□□□□ 0.7
TM9SF1-201ENST00000261789 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
TM9SF1-201ENST00000261789 SCN11AQ9UI33 1791 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 CYP21A2P08686 494 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 PDCP20941 246 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 Q6ZUG5 572 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 NEK1Q96PY6 1258 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 DACT1Q9NYF0 836 aa19.42■□□□□ 0.7
TM9SF1-201ENST00000261789 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 NOLC1Q14978 699 aaKnown RBP eCLIP19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 USPL1Q5W0Q7 1092 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 HMG20BQ9P0W2 317 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 JCADQ9P266 1359 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 MRC1P22897 1456 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 CCDC192P0DO97 292 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 TSGA10IPQ3SY00 556 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
TM9SF1-201ENST00000261789 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 FOSBP53539 338 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 RABL6Q3YEC7 729 aaPredicted RBP19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 PIBF1Q8WXW3 757 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 LUZP1Q86V48 1076 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 LEO1Q8WVC0 666 aaPredicted RBP19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 PDCL3Q9H2J4 239 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
TM9SF1-201ENST00000261789 A0A0G2JLW4 131 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 CABP4P57796 275 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 TIMM10P62072 90 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 MAP3K11Q16584 847 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 GTF3C6Q969F1 213 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 DCAF5Q96JK2 942 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 GOLGA6L4A6NEF3 574 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 MCMDC2Q4G0Z9 681 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 STOX1Q6ZVD7 989 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 BRF1Q92994 677 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 ARID3AQ99856 593 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 HAUS7Q99871 368 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.69
TM9SF1-201ENST00000261789 AFDNP55196 1824 aaKnown RBP19.38■□□□□ 0.69
TM9SF1-201ENST00000261789 CASP7P55210 303 aa19.38■□□□□ 0.69
TM9SF1-201ENST00000261789 CEBPZQ03701 1054 aaKnown RBP19.38■□□□□ 0.69
TM9SF1-201ENST00000261789 TYRO3Q06418 890 aa19.38■□□□□ 0.69
TM9SF1-201ENST00000261789 ELP1O95163 1332 aa19.38■□□□□ 0.69
TM9SF1-201ENST00000261789 GOLIM4O00461 696 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 NR1I2O75469 434 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 HSPA2P54652 639 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 TSC1Q92574 1164 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 PGBD1Q96JS3 809 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 TNMDQ9H2S6 317 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 KCNF1Q9H3M0 494 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
TM9SF1-201ENST00000261789 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms