RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 MRC1P22897 1456 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 TSGA10IPQ3SY00 556 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 COPS6Q7L5N1 327 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 SPC24Q8NBT2 197 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 MRVI1Q9Y6F6 885 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 TYRO3Q06418 890 aa20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 PRIMPOLQ96LW4 560 aa20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 COL15A1P39059 1388 aa20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 FAM200AQ8TCP9 573 aa20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 SPATA32Q96LK8 384 aa20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 DBNLQ9UJU6 430 aaKnown RBP20.28■□□□□ 0.84
SLC52A1-201ENST00000254853 CAMTA1Q9Y6Y1 1673 aa20.27■□□□□ 0.84
SLC52A1-201ENST00000254853 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
SLC52A1-201ENST00000254853 DACT1Q9NYF0 836 aa20.27■□□□□ 0.84
SLC52A1-201ENST00000254853 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
SLC52A1-201ENST00000254853 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
SLC52A1-201ENST00000254853 USPL1Q5W0Q7 1092 aa20.27■□□□□ 0.83
SLC52A1-201ENST00000254853 CKAP2LQ8IYA6 745 aa20.27■□□□□ 0.83
SLC52A1-201ENST00000254853 LEO1Q8WVC0 666 aaPredicted RBP20.27■□□□□ 0.83
SLC52A1-201ENST00000254853 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 JAK2O60674 1132 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 ATP5JP18859 108 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 MTERF4Q7Z6M4 381 aaKnown RBP20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 KIAA1524Q8TCG1 905 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 TNMDQ9H2S6 317 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 C5P01031 1676 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 GOLGA6L4A6NEF3 574 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 CHGBP05060 677 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 RFX5P48382 616 aaPredicted RBP20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 TFCP2Q12800 502 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 TNNI3KQ59H18 835 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 LUZP1Q86V48 1076 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 TSC1Q92574 1164 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 SLC52A2Q9HAB3 445 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 FPGT-TNNI3KV9GXZ4 949 aa20.26■□□□□ 0.83
SLC52A1-201ENST00000254853 HMGN5P82970 282 aaKnown RBP20.25■□□□□ 0.83
SLC52A1-201ENST00000254853 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
SLC52A1-201ENST00000254853 TPM3P06753 285 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 CCDC129Q6ZRS4 1044 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 KDM6AO15550 1401 aaPredicted RBP20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 NPHP3Q7Z494 1330 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 KRT32Q14532 448 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 GTF3C6Q969F1 213 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 NEK1Q96PY6 1258 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 ARID3AQ99856 593 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
SLC52A1-201ENST00000254853 ERBB3P21860 1342 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 ANO6Q4KMQ2 910 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 GOLGA6L6A8MZA4 724 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 PGBD1Q96JS3 809 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 SEC62Q99442 399 aaKnown RBP20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 CLSTN2Q9H4D0 955 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 CBX8Q9HC52 389 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 ZNF609O15014 1411 aa20.23■□□□□ 0.83
SLC52A1-201ENST00000254853 GTF2F1P35269 517 aaKnown RBP eCLIP20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 Q6ZUG5 572 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 RAPGEF4Q8WZA2 1011 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 BRF1Q92994 677 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 DBNDD2Q9BQY9 259 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
SLC52A1-201ENST00000254853 PTGS1P23219 599 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 RESTQ13127 1097 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 RBM43Q6ZSC3 357 aaKnown RBP20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 UBE3BQ7Z3V4 1068 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 NR1I2O75469 434 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 HSP90B1P14625 803 aaKnown RBP20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 PHKG2P15735 406 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 DDX11Q96FC9 970 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
SLC52A1-201ENST00000254853 CYP21A2P08686 494 aa20.2■□□□□ 0.82
SLC52A1-201ENST00000254853 BICD2Q8TD16 824 aa20.2■□□□□ 0.82
SLC52A1-201ENST00000254853 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
SLC52A1-201ENST00000254853 RABL6Q3YEC7 729 aaPredicted RBP20.2■□□□□ 0.82
SLC52A1-201ENST00000254853 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.82
SLC52A1-201ENST00000254853 FAM177BA6PVY3 158 aa20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 DDX46Q7L014 1031 aaKnown RBP20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 HAUS7Q99871 368 aa20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 RFX7Q2KHR2 1363 aa20.19■□□□□ 0.82
SLC52A1-201ENST00000254853 TRPM3Q9HCF6 1732 aaPredicted RBP20.18■□□□□ 0.82
SLC52A1-201ENST00000254853 H3BQV1 296 aa20.18■□□□□ 0.82
SLC52A1-201ENST00000254853 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
SLC52A1-201ENST00000254853 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
SLC52A1-201ENST00000254853 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
SLC52A1-201ENST00000254853 TATP17735 454 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms