RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
AFP-201ENST00000226359 HOXA2O43364 376 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 NEFMP07197 916 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 CFHP08603 1231 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 RFX1P22670 979 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 POLD1P28340 1107 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 FUT2Q10981 343 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 FLAD1Q8NFF5 587 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 BTAF1O14981 1849 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
AFP-201ENST00000226359 ERVV-2B6SEH9 535 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
AFP-201ENST00000226359 SPTLC1O15269 473 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 CABP4P57796 275 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
AFP-201ENST00000226359 PKD1L3Q7Z443 1732 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 ZBTB7AO95365 584 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 IL13P35225 146 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 TMEM259Q4ZIN3 620 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 RGPD2P0DJD1 1756 aa7.53□□□□□ -1.2
AFP-201ENST00000226359 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.2
AFP-201ENST00000226359 PPP2R2DQ66LE6 453 aa7.52□□□□□ -1.2
AFP-201ENST00000226359 NYAP1Q6ZVC0 841 aa7.52□□□□□ -1.2
AFP-201ENST00000226359 GAS2L2Q8NHY3 880 aa7.52□□□□□ -1.2
AFP-201ENST00000226359 MAP2P11137 1827 aaKnown RBP7.52□□□□□ -1.2
AFP-201ENST00000226359 E9PSI1 815 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 BCAMP50895 628 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 KCNC4Q03721 635 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 PIGBQ92521 554 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 LRCH3Q96II8 777 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 PCDHGC3Q9UN70 934 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 KDRP35968 1356 aa7.52□□□□□ -1.21
AFP-201ENST00000226359 HMOX1P09601 288 aa7.51□□□□□ -1.21
AFP-201ENST00000226359 ZNF827Q17R98 1081 aa7.51□□□□□ -1.21
AFP-201ENST00000226359 ADAMTS19Q8TE59 1207 aa7.51□□□□□ -1.21
AFP-201ENST00000226359 LRRC4BQ9NT99 713 aa7.51□□□□□ -1.21
AFP-201ENST00000226359 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.51□□□□□ -1.21
AFP-201ENST00000226359 SHANK3Q9BYB0 1731 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 LOC102724428A0A0B4J2F2 783 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 FDX1P10109 184 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 SLC4A3P48751 1232 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 SIK1P57059 783 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 PAPPAQ13219 1627 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 BRD1O95696 1058 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
AFP-201ENST00000226359 PUS10Q3MIT2 529 aaKnown RBP7.5□□□□□ -1.21
AFP-201ENST00000226359 KAT6BQ8WYB5 2073 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 U2AF1L5P0DN76 240 aaPredicted RBP7.49□□□□□ -1.21
AFP-201ENST00000226359 PPP2R1AP30153 589 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 USP46P62068 366 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 U2AF1Q01081 240 aaKnown RBP eCLIP7.49□□□□□ -1.212e-11■■□□□ 13.6
AFP-201ENST00000226359 KCNA1Q09470 495 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 RTL5Q5HYW3 569 aaPredicted RBP7.49□□□□□ -1.21
AFP-201ENST00000226359 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 PNNQ9H307 717 aaKnown RBP7.49□□□□□ -1.21
AFP-201ENST00000226359 STK17AQ9UEE5 414 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
AFP-201ENST00000226359 LILRB3O75022 631 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 SSFA2P28290 1259 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 KCNQ4P56696 695 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 TEFQ10587 303 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 RALBP1Q15311 655 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 ANKK1Q8NFD2 765 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 RTF1Q92541 710 aaKnown RBP7.48□□□□□ -1.21
AFP-201ENST00000226359 MAP3K5Q99683 1374 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 CASZ1Q86V15 1759 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
AFP-201ENST00000226359 AP1G2O75843 785 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 PDE4CQ08493 712 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 SYMPKQ92797 1274 aaKnown RBP7.48□□□□□ -1.21
AFP-201ENST00000226359 ASAP1Q9ULH1 1129 aa7.48□□□□□ -1.21
AFP-201ENST00000226359 RTCBQ9Y3I0 505 aaKnown RBP7.48□□□□□ -1.21
AFP-201ENST00000226359 COL3A1P02461 1466 aaPredicted RBP7.47□□□□□ -1.21
AFP-201ENST00000226359 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 GNAT3A8MTJ3 354 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 RNMTO43148 476 aaKnown RBP7.47□□□□□ -1.21
AFP-201ENST00000226359 PRKAR2BP31323 418 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 GJA5P36382 358 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 SLC52A2Q9HAB3 445 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 HPS5Q9UPZ3 1129 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 MAPK8IP3Q9UPT6 1336 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 LY75O60449 1722 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 TOGARAM1Q9Y4F4 1720 aa7.47□□□□□ -1.21
AFP-201ENST00000226359 MTHFSDQ2M296 383 aaKnown RBP7.46□□□□□ -1.21
AFP-201ENST00000226359 CNTNAP4Q9C0A0 1308 aa7.46□□□□□ -1.21
AFP-201ENST00000226359 PTCD1O75127 700 aaKnown RBP7.46□□□□□ -1.22
AFP-201ENST00000226359 APLP1P51693 650 aa7.46□□□□□ -1.22
AFP-201ENST00000226359 RC3H1Q5TC82 1133 aaKnown RBP7.46□□□□□ -1.22
AFP-201ENST00000226359 MSL1Q68DK7 614 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms