RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 TRIM27P14373 513 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 CCT4P50991 539 aaKnown RBP18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 RASSF7Q02833 373 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 GRAPQ13588 217 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 SOGA3Q5TF21 947 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 ARFGEF1Q9Y6D6 1849 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 LAMB2P55268 1798 aa18.55■□□□□ 0.56
PCOLCE-201ENST00000223061 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 ZKSCAN2Q63HK3 967 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 CLUAP1Q96AJ1 413 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 NFKBIEO00221 500 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 NBPF7P0C2Y1 421 aaPredicted RBP18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 TTLL11Q8NHH1 800 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 PLA2G12BQ9BX93 195 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 RCAN3Q9UKA8 241 aa18.54■□□□□ 0.56
PCOLCE-201ENST00000223061 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
PCOLCE-201ENST00000223061 BBOX1O75936 387 aa18.53■□□□□ 0.56
PCOLCE-201ENST00000223061 GREM2Q9H772 168 aa18.53■□□□□ 0.56
PCOLCE-201ENST00000223061 YY1P25490 414 aa18.52■□□□□ 0.56
PCOLCE-201ENST00000223061 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-201ENST00000223061 EPHA10Q5JZY3 1008 aa18.52■□□□□ 0.55
PCOLCE-201ENST00000223061 USP44Q9H0E7 712 aa18.52■□□□□ 0.55
PCOLCE-201ENST00000223061 TAOK3Q9H2K8 898 aa18.52■□□□□ 0.55
PCOLCE-201ENST00000223061 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.55
PCOLCE-201ENST00000223061 FOXO4P98177 505 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 SUCLG2Q96I99 432 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 UTYO14607 1347 aa18.51■□□□□ 0.55
PCOLCE-201ENST00000223061 RPS8P62241 208 aaKnown RBP18.5■□□□□ 0.55
PCOLCE-201ENST00000223061 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
PCOLCE-201ENST00000223061 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
PCOLCE-201ENST00000223061 CC2D2BQ6DHV5 1058 aa18.5■□□□□ 0.55
PCOLCE-201ENST00000223061 COL4A1P02462 1669 aa18.5■□□□□ 0.55
PCOLCE-201ENST00000223061 CSF1RP07333 972 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 RNF181Q9P0P0 153 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 PRELPP51888 382 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 ANKRD18AQ8IVF6 992 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 CDC5LQ99459 802 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-201ENST00000223061 RTL9Q8NET4 1388 aa18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 LMNB1P20700 586 aa18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 ITGA6P23229 1130 aa18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 FKBP4Q02790 459 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
PCOLCE-201ENST00000223061 UBTFL1P0CB47 393 aaPredicted RBP18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 BICC1Q9H694 974 aaKnown RBP18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 ZNF277Q9NRM2 450 aaPredicted RBP18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 TAF1P21675 1872 aa18.47■□□□□ 0.55
PCOLCE-201ENST00000223061 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 MEIS3Q99687 375 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 PLIN1O60240 522 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 RLBP1P12271 317 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 IFIT5Q13325 482 aaKnown RBP18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 GRIPAP1Q4V328 841 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 MPNDQ8N594 471 aa18.46■□□□□ 0.55
PCOLCE-201ENST00000223061 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
PCOLCE-201ENST00000223061 PSMD1Q99460 953 aa18.45■□□□□ 0.54
PCOLCE-201ENST00000223061 GPSM2P81274 684 aa18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 PANK1Q8TE04 598 aa18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 NSFL1CQ9UNZ2 370 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 FER1L6Q2WGJ9 1857 aa18.44■□□□□ 0.54
PCOLCE-201ENST00000223061 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 ITPRIPQ8IWB1 547 aa18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 LRRFIP2Q9Y608 721 aaKnown RBP18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 CHD4Q14839 1912 aa18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 MYH3P11055 1940 aa18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 RABL6Q3YEC7 729 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 ZNF594Q96JF6 807 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 MPHOSPH8Q99549 860 aa18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-201ENST00000223061 GNAI3P08754 354 aa18.42■□□□□ 0.54
PCOLCE-201ENST00000223061 IARSP41252 1262 aaKnown RBP18.42■□□□□ 0.54
PCOLCE-201ENST00000223061 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
PCOLCE-201ENST00000223061 SUPT20HQ8NEM7 779 aa18.41■□□□□ 0.54
PCOLCE-201ENST00000223061 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 MS4A1P11836 297 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 ZNF526Q8TF50 670 aaPredicted RBP18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 PPIP5K2O43314 1243 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 AOC3Q16853 763 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 LARGE2Q8N3Y3 721 aa18.4■□□□□ 0.54
PCOLCE-201ENST00000223061 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms