RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 GPC2Q8N158 579 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 USP16Q9Y5T5 823 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
SNU13-201ENST00000215956 RLBP1P12271 317 aa15.39■□□□□ 0.05
SNU13-201ENST00000215956 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
SNU13-201ENST00000215956 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
SNU13-201ENST00000215956 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
SNU13-201ENST00000215956 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
SNU13-201ENST00000215956 NIP7Q9Y221 180 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNU13-201ENST00000215956 SNED1Q8TER0 1413 aa15.38■□□□□ 0.05
SNU13-201ENST00000215956 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
SNU13-201ENST00000215956 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNU13-201ENST00000215956 ABCC4O15439 1325 aa15.37■□□□□ 0.05
SNU13-201ENST00000215956 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
SNU13-201ENST00000215956 TMEM57Q8N5G2 664 aa15.37■□□□□ 0.05
SNU13-201ENST00000215956 COL4A5P29400 1685 aa15.37■□□□□ 0.05
SNU13-201ENST00000215956 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 FAM177BA6PVY3 158 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 RGL2O15211 777 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 JDP2Q8WYK2 163 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 PSMD1Q99460 953 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
SNU13-201ENST00000215956 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
SNU13-201ENST00000215956 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
SNU13-201ENST00000215956 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 NUP98P52948 1817 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
SNU13-201ENST00000215956 ECE1P42892 770 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
SNU13-201ENST00000215956 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 BEGAINQ9BUH8 593 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
SNU13-201ENST00000215956 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
SNU13-201ENST00000215956 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
SNU13-201ENST00000215956 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
SNU13-201ENST00000215956 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
SNU13-201ENST00000215956 SCNN1DP51172 638 aa15.33■□□□□ 0.04
SNU13-201ENST00000215956 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.04
SNU13-201ENST00000215956 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNU13-201ENST00000215956 GRM1Q13255 1194 aa15.33■□□□□ 0.04
SNU13-201ENST00000215956 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
SNU13-201ENST00000215956 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
SNU13-201ENST00000215956 HLFQ16534 295 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 INTS3Q68E01 1043 aaKnown RBP15.32■□□□□ 0.04
SNU13-201ENST00000215956 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 GPR101Q96P66 508 aaPredicted RBP15.32■□□□□ 0.04
SNU13-201ENST00000215956 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 CASP8AP2Q9UKL3 1982 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 EPS15P42566 896 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 CCT4P50991 539 aaKnown RBP15.32■□□□□ 0.04
SNU13-201ENST00000215956 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
SNU13-201ENST00000215956 HDGFL1Q5TGJ6 251 aa15.32■□□□□ 0.04
SNU13-201ENST00000215956 RGS19P49795 217 aa15.31■□□□□ 0.04
SNU13-201ENST00000215956 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
SNU13-201ENST00000215956 LARGE2Q8N3Y3 721 aa15.31■□□□□ 0.04
SNU13-201ENST00000215956 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
SNU13-201ENST00000215956 TRAF5O00463 557 aa15.3■□□□□ 0.04
SNU13-201ENST00000215956 CST9Q5W186 159 aa15.3■□□□□ 0.04
SNU13-201ENST00000215956 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
SNU13-201ENST00000215956 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
SNU13-201ENST00000215956 RIC1Q4ADV7 1423 aa15.3■□□□□ 0.04
SNU13-201ENST00000215956 TNRC18O15417 2968 aaPredicted RBP15.3■□□□□ 0.04
SNU13-201ENST00000215956 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
SNU13-201ENST00000215956 RPGRQ92834 1020 aaKnown RBP15.29■□□□□ 0.04
SNU13-201ENST00000215956 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
SNU13-201ENST00000215956 PCDHB15Q9Y5E8 787 aa15.29■□□□□ 0.04
SNU13-201ENST00000215956 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 PDE4DIPQ5VU43 2346 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 AOC2O75106 756 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 HOXA10P31260 410 aaPredicted RBP15.28■□□□□ 0.04
SNU13-201ENST00000215956 MAP2K2P36507 400 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 FLIIQ13045 1269 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 NIM1KQ8IY84 436 aa15.28■□□□□ 0.04
SNU13-201ENST00000215956 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
SNU13-201ENST00000215956 IGHDP01880 384 aa15.27■□□□□ 0.03
SNU13-201ENST00000215956 SLC51AQ86UW1 340 aa15.27■□□□□ 0.03
SNU13-201ENST00000215956 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.03
SNU13-201ENST00000215956 ERVV-1B6SEH8 477 aa15.26■□□□□ 0.03
SNU13-201ENST00000215956 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
SNU13-201ENST00000215956 CA12O43570 354 aa15.26■□□□□ 0.03
SNU13-201ENST00000215956 FKBP5Q13451 457 aaPredicted RBP15.26■□□□□ 0.03
SNU13-201ENST00000215956 ADARB2Q9NS39 739 aaKnown RBP15.26■□□□□ 0.03
SNU13-201ENST00000215956 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
SNU13-201ENST00000215956 SAPCD2Q86UD0 394 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 MCOLN1Q9GZU1 580 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 GPRC5DQ9NZD1 345 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 UBN2Q6ZU65 1347 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 CELF2O95319 508 aaKnown RBP15.25■□□□□ 0.03
SNU13-201ENST00000215956 GCC1Q96CN9 775 aa15.25■□□□□ 0.03
SNU13-201ENST00000215956 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms