RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 COL4A1P02462 1669 aa20.22■□□□□ 0.83
SS18L2-201ENST00000011691 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 HSPA1AP0DMV8 641 aaKnown RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 HSPA1BP0DMV9 641 aaKnown RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 LMOD1P29536 600 aaPredicted RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 COL13A1Q5TAT6 717 aaPredicted RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 PNMA8AQ86V59 439 aaPredicted RBP20.22■□□□□ 0.83
SS18L2-201ENST00000011691 FAM89AQ96GI7 184 aa20.22■□□□□ 0.83
SS18L2-201ENST00000011691 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
SS18L2-201ENST00000011691 BBOX1O75936 387 aa20.21■□□□□ 0.83
SS18L2-201ENST00000011691 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
SS18L2-201ENST00000011691 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
SS18L2-201ENST00000011691 EPS15P42566 896 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 SCNN1DP51172 638 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 GNAI1P63096 354 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 GRAPQ13588 217 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 SP8Q8IXZ3 490 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
SS18L2-201ENST00000011691 ISCA1Q9BUE6 129 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
SS18L2-201ENST00000011691 IFT57Q9NWB7 429 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 DUOX1Q9NRD9 1551 aa20.2■□□□□ 0.82
SS18L2-201ENST00000011691 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
SS18L2-201ENST00000011691 CNTROBQ8N137 903 aa20.19■□□□□ 0.82
SS18L2-201ENST00000011691 MPNDQ8N594 471 aa20.19■□□□□ 0.82
SS18L2-201ENST00000011691 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
SS18L2-201ENST00000011691 TMEM88BA6NKF7 163 aa20.18■□□□□ 0.82
SS18L2-201ENST00000011691 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
SS18L2-201ENST00000011691 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
SS18L2-201ENST00000011691 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
SS18L2-201ENST00000011691 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
SS18L2-201ENST00000011691 C8orf58Q8NAV2 365 aa20.17■□□□□ 0.82
SS18L2-201ENST00000011691 RTFDC1Q9BY42 306 aaPredicted RBP20.17■□□□□ 0.82
SS18L2-201ENST00000011691 CXCL9Q07325 125 aa20.16■□□□□ 0.82
SS18L2-201ENST00000011691 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
SS18L2-201ENST00000011691 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
SS18L2-201ENST00000011691 ZNRF3Q9ULT6 936 aa20.16■□□□□ 0.82
SS18L2-201ENST00000011691 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
SS18L2-201ENST00000011691 KIAA2012Q0VF49 1180 aa20.15■□□□□ 0.82
SS18L2-201ENST00000011691 MYD88Q99836 296 aa20.15■□□□□ 0.82
SS18L2-201ENST00000011691 VPS33BQ9H267 617 aa20.15■□□□□ 0.82
SS18L2-201ENST00000011691 SPEF2Q9C093 1822 aa20.14■□□□□ 0.81
SS18L2-201ENST00000011691 IRS4O14654 1257 aaPredicted RBP20.14■□□□□ 0.81
SS18L2-201ENST00000011691 RAD17O75943 681 aa20.14■□□□□ 0.81
SS18L2-201ENST00000011691 VEGFBP49765 207 aa20.13■□□□□ 0.81
SS18L2-201ENST00000011691 GMPSP49915 693 aaPredicted RBP20.13■□□□□ 0.81
SS18L2-201ENST00000011691 SF3B3Q15393 1217 aaKnown RBP20.13■□□□□ 0.81
SS18L2-201ENST00000011691 JARID2Q92833 1246 aaPredicted RBP20.13■□□□□ 0.81
SS18L2-201ENST00000011691 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
SS18L2-201ENST00000011691 GPRC5DQ9NZD1 345 aa20.13■□□□□ 0.81
SS18L2-201ENST00000011691 MYH3P11055 1940 aa20.12■□□□□ 0.81
SS18L2-201ENST00000011691 CIAPIN1Q6FI81 312 aa20.12■□□□□ 0.81
SS18L2-201ENST00000011691 USP50Q70EL3 339 aaPredicted RBP20.12■□□□□ 0.81
SS18L2-201ENST00000011691 TMC4Q7Z404 712 aa20.12■□□□□ 0.81
SS18L2-201ENST00000011691 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
SS18L2-201ENST00000011691 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
SS18L2-201ENST00000011691 ABT1Q9ULW3 272 aaKnown RBP20.12■□□□□ 0.81
SS18L2-201ENST00000011691 NSFL1CQ9UNZ2 370 aaKnown RBP20.12■□□□□ 0.81
SS18L2-201ENST00000011691 TRAF5O00463 557 aa20.11■□□□□ 0.81
SS18L2-201ENST00000011691 RIMBP2O15034 1052 aa20.11■□□□□ 0.81
SS18L2-201ENST00000011691 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
SS18L2-201ENST00000011691 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
SS18L2-201ENST00000011691 ADARB2Q9NS39 739 aaKnown RBP20.11■□□□□ 0.81
SS18L2-201ENST00000011691 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
SS18L2-201ENST00000011691 C6orf229H3BNL8 230 aa20.1■□□□□ 0.81
SS18L2-201ENST00000011691 CAPN15O75808 1086 aa20.1■□□□□ 0.81
SS18L2-201ENST00000011691 GPSM2P81274 684 aa20.1■□□□□ 0.81
SS18L2-201ENST00000011691 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
SS18L2-201ENST00000011691 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
SS18L2-201ENST00000011691 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
SS18L2-201ENST00000011691 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
SS18L2-201ENST00000011691 CCDC85AQ96PX6 553 aaPredicted RBP20.09■□□□□ 0.81
SS18L2-201ENST00000011691 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
SS18L2-201ENST00000011691 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
SS18L2-201ENST00000011691 SCN9AQ15858 1988 aa20.08■□□□□ 0.81
SS18L2-201ENST00000011691 SHTN1A0MZ66 631 aa20.08■□□□□ 0.81
SS18L2-201ENST00000011691 TNIP1Q15025 636 aa20.08■□□□□ 0.81
SS18L2-201ENST00000011691 DEFB115Q30KQ5 88 aa20.08■□□□□ 0.81
SS18L2-201ENST00000011691 POLLQ9UGP5 575 aa20.08■□□□□ 0.81
SS18L2-201ENST00000011691 POLR2AP24928 1970 aaKnown RBP20.08■□□□□ 0.8
SS18L2-201ENST00000011691 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
SS18L2-201ENST00000011691 FOXN1O15353 648 aa20.07■□□□□ 0.8
SS18L2-201ENST00000011691 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 RPS8P62241 208 aaKnown RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
SS18L2-201ENST00000011691 METTL22Q9BUU2 404 aaPredicted RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 CWC25Q9NXE8 425 aaPredicted RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
SS18L2-201ENST00000011691 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
SS18L2-201ENST00000011691 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
SS18L2-201ENST00000011691 GRM1Q13255 1194 aa20.06■□□□□ 0.8
SS18L2-201ENST00000011691 DOK7Q18PE1 504 aa20.06■□□□□ 0.8
SS18L2-201ENST00000011691 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
SS18L2-201ENST00000011691 TRPM4Q8TD43 1214 aa20.06■□□□□ 0.8
SS18L2-201ENST00000011691 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
SS18L2-201ENST00000011691 MRS2Q9HD23 443 aa20.05■□□□□ 0.8
SS18L2-201ENST00000011691 CNOT7Q9UIV1 285 aaKnown RBP20.05■□□□□ 0.8
SS18L2-201ENST00000011691 CDHR2Q9BYE9 1310 aa20.04■□□□□ 0.8
SS18L2-201ENST00000011691 PI4KAP2A4QPH2 592 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms