RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 PhaxQ9JJT9 385 aaKnown RBP31.06■■■□□ 2.56
Tpm1-216ENSMUST00000113707 C4bP01029 1738 aa31.05■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Zkscan8Q8BSL0 588 aa31.05■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Plcd4Q8K3R3 807 aa31.05■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Ttc14Q9CSP9 761 aa31.05■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Smarce1O54941 411 aaKnown RBP31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Mdm2P23804 489 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Ppil4Q9CXG3 492 aaKnown RBP31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Add2Q9QYB8 725 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Arhgap33Q80YF9 1305 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Gm13023A2A8N2 498 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Dctn1O08788 1281 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 MecomP14404 1042 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Rtkn2Q14B46 604 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Rdm1Q9CQK3 281 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Mapk8ip1Q9WVI9 707 aa31.04■■■□□ 2.56
Tpm1-216ENSMUST00000113707 ZyxQ62523 564 aa31.03■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Phactr2B1AVP0 632 aa31.02■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Znf692Q3U381 531 aa31.02■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Fnbp4Q6ZQ03 1031 aa31.02■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Ubxn10Q8BG34 277 aa31.02■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Bmp2kQ91Z96 1138 aa31.02■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Pdzrn3Q69ZS0 1063 aa31.01■■■□□ 2.56
Tpm1-216ENSMUST00000113707 Ddx46Q569Z5 1032 aaKnown RBP31.01■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Zc3h12cQ5DTV4 884 aa31.01■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Slc38a10Q5I012 1090 aa31.01■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Q8BT18 775 aa31.01■■■□□ 2.55
Tpm1-216ENSMUST00000113707 KinQ8K339 391 aa31.01■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Lrp5Q91VN0 1614 aa31■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Vwa3bJ9JI28 736 aa31■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Slc4a1P04919 929 aa31■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Ak2Q9WTP6 239 aa31■■■□□ 2.55
Tpm1-216ENSMUST00000113707 CoblQ5NBX1 1337 aaKnown RBP31■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Rbm8a2A0A0N4SUH6 174 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 TsksO54887 585 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Rbm8aQ9CWZ3 174 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Fbxo3Q9DC63 480 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Anxa1P10107 346 aaKnown RBP30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Utp18Q5SSI6 552 aaKnown RBP30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Ints3Q7TPD0 1041 aaKnown RBP30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Antxr1Q9CZ52 562 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 4931408C20RikE9PWP9 1381 aa30.99■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Cyp2c23E9Q5K4 494 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 EvcP57680 1005 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Atp6v1dP57746 247 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Atp2b3Q0VF55 1220 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Golim4Q8BXA1 655 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Ccdc7Q9D541 371 aa30.98■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Npy5rO70342 466 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Snrpa1P57784 255 aaKnown RBP30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Nek11Q8C0Q4 628 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Npc1l1Q6T3U4 1333 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Plch1Q4KWH5 1682 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Bin2D3Z6Q9 489 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Atp1b3P97370 278 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Plbd2Q3TCN2 594 aa30.97■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Gimap8Q75N62 688 aa30.96■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Slx4ipQ9D7Y9 413 aa30.96■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Plekho1Q9JIY0 408 aa30.96■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Kcnq5Q9JK45 933 aa30.96■■■□□ 2.55
Tpm1-216ENSMUST00000113707 StrbpQ91WM1 672 aaKnown RBP30.95■■■□□ 2.55
Tpm1-216ENSMUST00000113707 Gjb2Q00977 226 aa30.95■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Zkscan1Q8BGS3 561 aaKnown RBP30.95■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Filip1lQ6P6L0 1131 aa30.94■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Rab3gap1Q80UJ7 981 aa30.94■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Dmrt2Q8BG36 561 aa30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Erc1Q99MI1 1120 aa30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 TnksQ6PFX9 1320 aa30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Hsp90aa1P07901 733 aaKnown RBP30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Sgsm2Q80U12 1005 aa30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 HmcesQ8R1M0 353 aaKnown RBP30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Ppp4r3bQ922R5 820 aa30.93■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Pde8bE9Q4S1 865 aa30.92■■■□□ 2.54
Tpm1-216ENSMUST00000113707 NpeppsQ11011 920 aa30.92■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Fam160b2Q80YR2 744 aa30.92■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Stox1B2RQL2 990 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Cyp3a57D3YYZ0 503 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Rnf20Q5DTM8 973 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Cypt2Q6P924 180 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Ift57Q8BXG3 429 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Plekhf1Q3TB82 279 aa30.91■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Cfap44E9Q5M6 1843 aa30.9■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Kcnb2A6H8H5 907 aa30.9■■■□□ 2.54
Tpm1-216ENSMUST00000113707 RubcnlQ3TD16 648 aa30.9■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Ccne2Q9Z238 404 aa30.9■■■□□ 2.54
Tpm1-216ENSMUST00000113707 CltaO08585 235 aa30.89■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Ppp6r1Q7TSI3 856 aa30.89■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Riok1Q922Q2 567 aa30.89■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Dmrtc1Q9D9R7 182 aa30.89■■■□□ 2.54
Tpm1-216ENSMUST00000113707 Ugt1a5B2RT14 529 aa30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Ltv1Q6NSQ7 470 aaKnown RBP30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Tti2Q8BGV4 512 aa30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Mb21d2Q8C525 428 aa30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Atf7Q8R0S1 413 aa30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Hmg20bQ9Z104 317 aa30.88■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Sept1P42209 366 aa30.87■■■□□ 2.53
Tpm1-216ENSMUST00000113707 GalcP54818 684 aa30.87■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Ddx19aQ61655 478 aaKnown RBP30.87■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Foxo3Q9WVH4 672 aa30.87■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Cchcr1Q8K2I2 770 aa30.87■■■□□ 2.53
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms