RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Tbc1d8Q9Z1A9 1134 aa20.22■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Gdf11Q9Z1W4 405 aa20.22■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Myo3bQ1EG27 1305 aa20.22■□□□□ 0.83
Tpm1-215ENSMUST00000113705 1700029H14RikE9PY36 240 aa20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Anxa1P10107 346 aaKnown RBP20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Fgd1P52734 960 aa20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Snrpa1P57784 255 aaKnown RBP20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 McamQ8R2Y2 648 aaKnown RBP20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Celf1P28659 486 aaKnown RBP20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Adgre1Q61549 931 aa20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Mum1Q6DID5 682 aa20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Myoz2Q9JJW5 264 aa20.21■□□□□ 0.83
Tpm1-215ENSMUST00000113705 Yy1Q00899 414 aa20.2■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Tgfb1i1Q62219 461 aa20.2■□□□□ 0.82
Tpm1-215ENSMUST00000113705 IntuQ059U7 942 aa20.19■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Chmp3Q9CQ10 224 aa20.19■□□□□ 0.82
Tpm1-215ENSMUST00000113705 MvpQ9EQK5 861 aa20.19■□□□□ 0.82
Tpm1-215ENSMUST00000113705 EvplQ9D952 2035 aa20.18■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Ankrd44B2RXR6 993 aa20.18■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Znf710Q3U288 666 aa20.18■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Trim58Q5NCC9 485 aa20.18■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Ube4aE9Q735 1028 aa20.17■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Slc38a10Q5I012 1090 aa20.17■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Skor1Q8BX46 964 aa20.17■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Prl3d2F6R3P9 224 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Prkar2bP31324 416 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Tceal9Q9DD24 104 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Stk32bQ9JJX8 414 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Nrxn2E9Q7X7 1710 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Znf496Q5SXI5 585 aa20.16■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Upf2A2AT37 1269 aaKnown RBP20.15■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Ell2Q3UKU1 639 aa20.15■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Ncoa5Q91W39 579 aaKnown RBP20.15■□□□□ 0.82
Tpm1-215ENSMUST00000113705 Heg1E9Q7X6 1337 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Gnai2P08752 355 aaKnown RBP20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Gpr182P43142 395 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Thrap3Q569Z6 951 aaKnown RBP20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Vil1Q62468 827 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Best3Q6H1V1 669 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Slc14a2Q8R4T9 930 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Sh3bp5Q9Z131 463 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Zfp646Q6NV66 1788 aa20.14■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Bin2D3Z6Q9 489 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Triml2E9PW10 424 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Sytl4Q9R0Q1 673 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Stk36Q69ZM6 1316 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 AppP12023 770 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Il15P48346 162 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Map3k9Q3U1V8 1077 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Usp48Q3V0C5 1052 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Slc4a10Q5DTL9 1118 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Tmem143Q8VD26 458 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 LratQ9JI60 231 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Slfn1Q9Z0I7 337 aa20.13■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Dhx38Q80X98 1228 aa20.12■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Plekhg6Q8R0J1 787 aa20.12■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Pa2g4P50580 394 aaKnown RBP20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Gtpbp6Q3U6U5 514 aa20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Rab3gap1Q80UJ7 981 aa20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Q8C5K5 320 aa20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Klf15Q9EPW2 415 aa20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Plekho1Q9JIY0 408 aa20.11■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Eddm13E9Q7F5 164 aa20.1■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Scn9aQ62205 1984 aa20.09■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Casp1P29452 402 aa20.09■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Ftl2P49945 183 aa20.09■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Cwc27Q3TKY6 469 aa20.09■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Ier5O89113 308 aa20.08■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Aldh1l2Q8K009 923 aa20.08■□□□□ 0.81
Tpm1-215ENSMUST00000113705 Prl3d3A0A0M6L0J6 224 aa20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Bend4P86174 541 aa20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Mex3cQ05A36 652 aaKnown RBP20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Glis3Q6XP49 780 aa20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Glis2Q8VDL9 521 aa20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Fam122aQ9DB52 284 aa20.08■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Glt1d1A4FUP9 346 aa20.07■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Setdb1O88974 1307 aa20.07■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Sult6b1P0CC03 303 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Tspyl2Q7TQI8 677 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Rbm33Q9CXK9 1231 aaKnown RBP20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Rrs1Q9CYH6 365 aaKnown RBP20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Ly6iQ9WU67 134 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Carmil3Q3UFQ8 1375 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Col3a1P08121 1464 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Vsig10D3YX43 558 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Osbpl5Q9ER64 874 aa20.06■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Znfx1Q8R151 1909 aaKnown RBP20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Phrf1A6H619 1682 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Cfap44E9Q5M6 1843 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Srgap3Q812A2 1099 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Tmem87bQ8BKU8 555 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Zkscan8Q8BSL0 588 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Mical3Q8CJ19 1993 aa20.05■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Ets1P27577 440 aa20.04■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Lrch1P62046 709 aa20.04■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Dcdc2bF7BCK0 340 aa20.03■□□□□ 0.8
Tpm1-215ENSMUST00000113705 NpcdF8VQB8 469 aa20.03■□□□□ 0.8
Tpm1-215ENSMUST00000113705 Eya2O08575 532 aa20.03■□□□□ 0.8
Tpm1-215ENSMUST00000113705 GabrdP22933 449 aa20.03■□□□□ 0.8
Tpm1-215ENSMUST00000113705 VgfQ0VGU4 617 aa20.03■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms