RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Sept14Q9DA97 430 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gbp1Q01514 589 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gramd4Q8CB44 633 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Znf394Q9Z1D9 521 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 NmiO35309 314 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Esyt1Q3U7R1 1092 aaKnown RBP17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Tmco5aQ9D9D5 303 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gm28919A0A087WP35 240 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 ArsiQ32KI9 573 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 SlmapQ3URD3 845 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Egfl6Q9JJZ5 550 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Setdb1O88974 1307 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Sycp2lA0A0M3U1B0 842 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Slc4a4O88343 1079 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Pde4dQ01063 747 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Top1Q04750 767 aaKnown RBP17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Luc7l2Q7TNC4 392 aaKnown RBP17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Serpinc1P32261 465 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gas8Q60779 478 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Zranb1Q7M760 708 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Plcd3Q8K2J0 785 aa17.79■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Znf18Q810A1 556 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Plb1Q3TTY0 1478 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 AqrQ8CFQ3 1481 aaKnown RBP17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 AU019823E9PUQ3 292 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Asic1Q6NXK8 526 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Pik3c2gO70167 1506 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Trap1aP19473 224 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 DesP31001 469 aaKnown RBP17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Vgll3P85442 326 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Tbc1d5Q80XQ2 815 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Kcnn1Q9EQR3 537 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Pa2g4P50580 394 aaKnown RBP17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Zkscan4Q5SZT6 480 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Dync1i1O88485 628 aa17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Uso1Q9Z1Z0 959 aaKnown RBP17.78■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Myo1bP46735 1107 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Igflr1Q3U4N7 345 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Tubb4aQ9D6F9 444 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Fam160b2Q80YR2 744 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Frat2Q8K025 231 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Vps36Q91XD6 386 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Neo1P97798 1493 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gm7347D3YYI9 267 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Zfpm1O35615 995 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Aldh8a1Q8BH00 487 aa17.77■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gm3409A0A0G2JE67 319 aa17.77■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Rasal2E9PW37 1286 aa17.77■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Nucb1Q02819 459 aaKnown RBP17.77■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Neurog2P70447 263 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Cnnm2Q3TWN3 875 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Sec62Q8BU14 398 aaKnown RBP17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Lmod1Q8BVA4 595 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ttc12Q8BW49 704 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Tmx3Q8BXZ1 456 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 GlmnQ8BZM1 596 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Atp8b3Q6UQ17 1335 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Nsrp1Q5NCR9 542 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Pdzrn3Q69ZS0 1063 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Usp11Q99K46 921 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ddx23D3Z0M9 819 aaKnown RBP17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Tmem132eQ6IEE6 982 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Rapgef3Q8VCC8 918 aa17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Nip7Q9CXK8 180 aaKnown RBP17.76■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ndufa8Q9DCJ5 172 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Mcmdc2E9Q956 681 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Eif3j1Q3UGC7 261 aaKnown RBP17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Eif3j2Q66JS6 263 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Cep19Q9CQA8 163 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Tti2Q8BGV4 512 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Bicd1Q8BR07 835 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 DroshaQ5HZJ0 1373 aaKnown RBP17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Mxra7Q9CZH7 178 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ak2Q9WTP6 239 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Frmpd2A0A140LI67 1392 aa17.75■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ube3aO08759 870 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Grm8P47743 908 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Atp2b3Q0VF55 1220 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 RestQ8VIG1 1082 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Samd15F6XZJ7 620 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Akr1c19G3X9Y6 323 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Gzf1Q4VBD9 706 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Dmrt2Q8BG36 561 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Gm28510A0A087WP28 240 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ccdc6D3YZP9 469 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Zfp397Q7TNK4 527 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Mrc2Q64449 1479 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 MarcksP26645 309 aaKnown RBP17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Mnat1P51949 309 aa17.74■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Mlh3A0A1Y7VMP7 1443 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Spa17Q62252 149 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ubxn1Q922Y1 297 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Krt7Q9DCV7 457 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Dennd3A2RT67 1274 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ccdc170D3YXL0 722 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ehbp1Q69ZW3 1231 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Efcab2Q9CQ46 164 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Rufy3Q9D394 469 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Psmb7P70195 277 aa17.73■□□□□ 0.43
Ubr2-201ENSMUST00000113335 Ublcp1Q8BGR9 318 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms