RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Exoc1Q8R3S6 894 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Lrrc23O35125 340 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Krt13P08730 437 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Mum1l1Q4VA55 681 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Ces1aE9PYP1 563 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Tagap1P0CAX8 505 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Fgfr1opQ66JX5 399 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Fam76aQ922G2 307 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Zbtb3Q91X45 518 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Traf1P39428 409 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 LyarQ08288 388 aaKnown RBP18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Atp6v0a2P15920 856 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Dmrt2Q8BG36 561 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Rassf4Q8CB96 322 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Actn2Q9JI91 894 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Fam186bD3Z420 943 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Tcp11l1Q8BTG3 509 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Brd3Q8K2F0 726 aaKnown RBP18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Rsph3bQ9DA80 389 aa18.78■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Smarca5Q91ZW3 1051 aaKnown RBP18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Smc6Q924W5 1097 aa18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Eif2aQ8BJW6 581 aaKnown RBP18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Taf4bG5E8Z2 855 aa18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 GpkowQ56A08 488 aa18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Gimap8Q75N62 688 aa18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 HscbQ8K3A0 234 aa18.77■□□□□ 0.6
Ubr3-202ENSMUST00000112251 Msl1Q6PDM1 616 aa18.77■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Krt23Q99PS0 422 aa18.77■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Tspyl2Q7TQI8 677 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rab44Q8CB87 725 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ppp1r21Q3TDD9 780 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ttll12Q3UDE2 639 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Myo6Q64331 1265 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Dapk3O54784 448 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rimbp2Q80U40 1072 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Sept8Q8CHH9 429 aa18.76■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Calm1P0DP26 149 aaKnown RBP18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Calm2P0DP27 149 aaKnown RBP18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Calm3P0DP28 149 aaKnown RBP18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 NpcdF8VQB8 469 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Kif11Q6P9P6 1052 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Calcoco1Q8CGU1 691 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 RragbQ6NTA4 374 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rapgef3Q8VCC8 918 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 HgsQ99LI8 775 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Q9D9H8 365 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Slc7a3P70423 618 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ppfia3P60469 1194 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Sun3Q5SS91 320 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rps6ka2Q9WUT3 733 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Krt18P05784 423 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rnf41Q8BH75 317 aa18.75■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Kif2aP28740 705 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ampd3O08739 766 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Tnip1Q9WUU8 647 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Stim2P83093 746 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Tuft1O08970 390 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 ImpactO55091 318 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Rbm27Q5SFM8 1060 aaKnown RBP18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Usp37Q8C0R0 979 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Pih1h3bQ8C6P5 218 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Tnnc1P19123 161 aa18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Puf60Q3UEB3 564 aaKnown RBP18.74■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ptpn14Q62130 1189 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Krt79Q8VED5 531 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ncf1Q09014 390 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Pja2Q80U04 707 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ubxn1Q922Y1 297 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ophn1Q99J31 802 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Armc3A2AU72 881 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ift88Q61371 824 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Setdb1O88974 1307 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Tcerg1lQ3B807 590 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Zfyve27Q3TXX3 415 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Gbp5Q8CFB4 590 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Mis12Q9CY25 206 aa18.73■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Cdc37l1Q9CZP7 335 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Speer2E9Q9U2 264 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Iqca1lA6H690 825 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Metap2O08663 478 aaKnown RBP18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Slc4a8Q8JZR6 1089 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Bms1Q6PGF5 1284 aaKnown RBP18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Klhl30Q8C3F7 581 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Ddx49Q4FZF3 480 aaKnown RBP18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 RilpQ5ND29 369 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Bloc1s2Q9CWG9 143 aa18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 AticQ9CWJ9 592 aaKnown RBP18.72■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Lztfl1Q9JHQ5 299 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Myo1bP46735 1107 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Skap1Q3UUV5 355 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Sestd1Q80UK0 696 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 TkfcQ8VC30 578 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Mrpl44Q9CY73 333 aaKnown RBP18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Mmel1Q9JLI3 765 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Pet2A2AHY8 747 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Limch1Q3UH68 1057 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Depdc1bQ8BH88 529 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Bag2Q91YN9 210 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Enox2Q8R0Z2 598 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 HhatQ8BMT9 499 aa18.71■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms